PDB file parser and structure class implemented in Python.
about
Biopython: freely available Python tools for computational molecular biology and bioinformaticsAn evolutionary method for learning HMM structure: prediction of protein secondary structurePALSSE: a program to delineate linear secondary structural elements from protein structures.Full cyclic coordinate descent: solving the protein loop closure problem in Calpha spaceShort strong hydrogen bonds in proteins: a case study of rhamnogalacturonan acetylesterase.Structural descriptors of gp120 V3 loop for the prediction of HIV-1 coreceptor usageImproving the accuracy of the structure prediction of the third hypervariable loop of the heavy chains of antibodiesAssessment of protein side-chain conformation prediction methods in different residue environments.Domain Hierarchy and closed Loops (DHcL): a server for exploring hierarchy of protein domain structure.Tableau-based protein substructure search using quadratic programming.p3d--Python module for structural bioinformatics.Applying PyRosetta molecular energies to separate properly oriented protein models from mirror models, obtained from contact maps.Beyond rotamers: a generative, probabilistic model of side chains in proteins.Fast and accurate protein substructure searching with simulated annealing and GPUsThe Impact of Native State Switching on Protein Sequence Evolution.Fully differentiable coarse-grained and all-atom knowledge-based potentials for RNA structure evaluation.Prediction of binding hot spot residues by using structural and evolutionary parameters.CSA: comprehensive comparison of pairwise protein structure alignmentsKoBaMIN: a knowledge-based minimization web server for protein structure refinement.Abstractions, algorithms and data structures for structural bioinformatics in PyCogent.PARAssign--paramagnetic NMR assignments of protein nuclei on the basis of pseudocontact shifts.PeptideBuilder: A simple Python library to generate model peptides.Structural analysis of B-cell epitopes in antibody:protein complexesTEMPy: a Python library for assessment of three-dimensional electron microscopy density fitsHPDB-Haskell library for processing atomic biomolecular structures in Protein Data Bank format.PyPDB: a Python API for the Protein Data Bank.A primer on python for life science researchersProDy: protein dynamics inferred from theory and experiments.MDAnalysis: a toolkit for the analysis of molecular dynamics simulations.Comprehensive, atomic-level characterization of structurally characterized protein-protein interactions: the PICCOLO databaseEvol and ProDy for bridging protein sequence evolution and structural dynamicsStructure of the house dust mite allergen Der f 2: implications for function and molecular basis of IgE cross-reactivity.Reliable B cell epitope predictions: impacts of method development and improved benchmarking.Predicting the accuracy of protein-ligand docking on homology models.DFGmodel: predicting protein kinase structures in inactive states for structure-based discovery of type-II inhibitorsThe relationship between relative solvent accessibility and evolutionary rate in protein evolution.Functional Advantages of Conserved Intrinsic Disorder in RNA-Binding Proteins.RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure predictionDIAL: a web server for the pairwise alignment of two RNA three-dimensional structures using nucleotide, dihedral angle and base-pairing similarities.Rational Design of Orthogonal Multipolar Interactions with Fluorine in Protein-Ligand Complexes
P2860
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P2860
PDB file parser and structure class implemented in Python.
description
2003 nî lūn-bûn
@nan
2003 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած
@hyw
2003 թվականի նոյեմբերին հրատարակված գիտական հոդված
@hy
2003年の論文
@ja
2003年論文
@yue
2003年論文
@zh-hant
2003年論文
@zh-hk
2003年論文
@zh-mo
2003年論文
@zh-tw
2003年论文
@wuu
name
PDB file parser and structure class implemented in Python.
@ast
PDB file parser and structure class implemented in Python.
@en
type
label
PDB file parser and structure class implemented in Python.
@ast
PDB file parser and structure class implemented in Python.
@en
prefLabel
PDB file parser and structure class implemented in Python.
@ast
PDB file parser and structure class implemented in Python.
@en
P356
P1433
P1476
PDB file parser and structure class implemented in Python.
@en
P2093
Bernard Manderick
P304
P356
10.1093/BIOINFORMATICS/BTG299
P407
P577
2003-11-01T00:00:00Z