Improved side-chain prediction accuracy using an ab initio potential energy function and a very large rotamer library
about
Improved prediction of protein side-chain conformations with SCWRL4A simple model of backbone flexibility improves modeling of side-chain conformational variabilityProtein side-chain modeling with a protein-dependent optimized rotamer library.Rotamer optimization for protein design through MAP estimation and problem-size reduction.Explicit orientation dependence in empirical potentials and its significance to side-chain modelingBeyond rotamers: a generative, probabilistic model of side chains in proteins.Protein side-chain packing problem: is there still room for improvement?Protein side chain modeling with orientation-dependent atomic force fields derived by series expansionsRASP: rapid modeling of protein side chain conformations.A protein-dependent side-chain rotamer library.IRECS: a new algorithm for the selection of most probable ensembles of side-chain conformations in protein models.Discrete RNA libraries from pseudo-torsional spaceAn energy-based conformer library for side chain optimization: improved prediction and adjustable sampling.Backbone dependency further improves side chain prediction efficiency in the Energy-based Conformer Library (bEBL).Adapting Poisson-Boltzmann to the self-consistent mean field theory: application to protein side-chain modeling.SDRL: a sequence-dependent protein side-chain rotamer library.Flat-Bottom Strategy for Improved Accuracy in Protein Side-Chain Placements.Protein side chain conformation predictions with an MMGBSA energy function.CIRSE: a solvation energy estimator compatible with flexible protein docking and design applications.Configurational-bias sampling technique for predicting side-chain conformations in proteinsOPUS-Rota: a fast and accurate method for side-chain modeling.Improving computational efficiency and tractability of protein design using a piecemeal approach. A strategy for parallel and distributed protein design.Fast and accurate prediction of protein side-chain conformations.Modeling mutations in protein structures.The dominant role of side-chain backbone interactions in structural realization of amino acid code. ChiRotor: a side-chain prediction algorithm based on side-chain backbone interactionsMCCE2: improving protein pKa calculations with extensive side chain rotamer sampling.Computational protein design with a generalized Born solvent model: application to Asparaginyl-tRNA synthetase.Computer-aided design of amino acid-based therapeutics: a review.
P2860
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P2860
Improved side-chain prediction accuracy using an ab initio potential energy function and a very large rotamer library
description
2004 nî lūn-bûn
@nan
2004 թուականի Մարտին հրատարակուած գիտական յօդուած
@hyw
2004 թվականի մարտին հրատարակված գիտական հոդված
@hy
2004年の論文
@ja
2004年論文
@yue
2004年論文
@zh-hant
2004年論文
@zh-hk
2004年論文
@zh-mo
2004年論文
@zh-tw
2004年论文
@wuu
name
Improved side-chain prediction ...... d a very large rotamer library
@ast
Improved side-chain prediction ...... d a very large rotamer library
@en
type
label
Improved side-chain prediction ...... d a very large rotamer library
@ast
Improved side-chain prediction ...... d a very large rotamer library
@en
prefLabel
Improved side-chain prediction ...... d a very large rotamer library
@ast
Improved side-chain prediction ...... d a very large rotamer library
@en
P2093
P2860
P356
P1433
P1476
Improved side-chain prediction ...... d a very large rotamer library
@en
P2093
A Joshua Wand
P Leslie Dutton
Ronald W Peterson
P2860
P304
P356
10.1110/PS.03250104
P577
2004-03-01T00:00:00Z