OPUS-Rota: a fast and accurate method for side-chain modeling.
about
Improved prediction of protein side-chain conformations with SCWRL4Incorporating post-translational modifications and unnatural amino acids into high-throughput modeling of protein structures.Assessment of protein side-chain conformation prediction methods in different residue environments.Protein side-chain modeling with a protein-dependent optimized rotamer library.3d interaction homology: The structurally known rotamers of tyrosine derive from a surprisingly limited set of information-rich hydropathic interaction environments described by maps.Explicit orientation dependence in empirical potentials and its significance to side-chain modelingTemplate-based protein modeling: recent methodological advances.Beyond rotamers: a generative, probabilistic model of side chains in proteins.Protein structure modelling and evaluation based on a 4-distance description of side-chain interactionsProtein side-chain packing problem: is there still room for improvement?Protein side chain modeling with orientation-dependent atomic force fields derived by series expansionsTrends in template/fragment-free protein structure predictionExploring the binding properties and structural stability of an opsin in the chytrid Spizellomyces punctatus using comparative and molecular modeling.RASP: rapid modeling of protein side chain conformations.SIDEpro: a novel machine learning approach for the fast and accurate prediction of side-chain conformations.An energy-based conformer library for side chain optimization: improved prediction and adjustable sampling.Recovering physical potentials from a model protein databankAdapting Poisson-Boltzmann to the self-consistent mean field theory: application to protein side-chain modeling.SDRL: a sequence-dependent protein side-chain rotamer library.Protein side chain conformation predictions with an MMGBSA energy function.Perspective: Coarse-grained models for biomolecular systems.Fast and accurate prediction of protein side-chain conformations.Protein loop selection using orientation-dependent force fields derived by parameter optimization.RNAfitme: a webserver for modeling nucleobase and nucleoside residue conformation in fixed-backbone RNA structures
P2860
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P2860
OPUS-Rota: a fast and accurate method for side-chain modeling.
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
2008年论文
@zh
2008年论文
@zh-cn
name
OPUS-Rota: a fast and accurate method for side-chain modeling.
@en
type
label
OPUS-Rota: a fast and accurate method for side-chain modeling.
@en
prefLabel
OPUS-Rota: a fast and accurate method for side-chain modeling.
@en
P2093
P2860
P356
P1433
P1476
OPUS-Rota: a fast and accurate method for side-chain modeling.
@en
P2093
Athanasios D Dousis
Jianpeng Ma
Mingyang Lu
P2860
P304
P356
10.1110/PS.035022.108
P577
2008-06-12T00:00:00Z