Automated builder and database of protein/membrane complexes for molecular dynamics simulations.
about
Revisiting hydrophobic mismatch with free energy simulation studies of transmembrane helix tilt and rotationMolecular dynamics simulations of biological membranes and membrane proteins using enhanced conformational sampling algorithmsMembrane Packing Problems: A short Review on computational Membrane Modeling Methods and ToolsKey diffusion mechanisms involved in regulating bidirectional water permeation across E. coli outer membrane lectinStructure-guided simulations illuminate the mechanism of ATP transport through VDAC1The Binding of Antibiotics in OmpF PorinA hydrophobic proline-rich motif is involved in the intracellular targeting of temperature-induced lipocalin.Allosteric signalling in the outer membrane translocation domain of PapC usher.Acidification asymmetrically affects voltage-dependent anion channel implicating the involvement of salt bridges.Energy transduction and alternating access of the mammalian ABC transporter P-glycoprotein.Refinement of OprH-LPS Interactions by Molecular Simulations.Conformational Transitions and Alternating-Access Mechanism in the Sarcoplasmic Reticulum Calcium Pump.Simulations of cellulose translocation in the bacterial cellulose synthase suggest a regulatory mechanism for the dimeric structure of cellulose.NMR-based simulation studies of Pf1 coat protein in explicit membranesPrediction of the structures of helical membrane proteins based on a minimum unfavorable contacts approach.Molecular dynamics simulation strategies for protein-micelle complexes.CHARMM-GUI MDFF/xMDFF Utilizer for Molecular Dynamics Flexible Fitting Simulations in Various Environments.Membrane Phase-Dependent Occlusion of Intramolecular GLUT1 Cavities Demonstrated by Simulations.Glycan Reader: automated sugar identification and simulation preparation for carbohydrates and glycoproteins.NMR observable-based structure refinement of DAP12-NKG2C activating immunoreceptor complex in explicit membranesStructure and dynamics of molecular rods in membranes: application of a spin-labeled rod.Molecular dynamics and NMR spectroscopy studies of E. coli lipopolysaccharide structure and dynamics.New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer ComplexOn the role of residue phosphorylation in 14-3-3 partners: AANAT as a case study.Role of the Ion Channel Extracellular Collar in AMPA Receptor GatingMembrane-Induced Folding of the Plant Stress Dehydrin Lti30.Comparative molecular dynamics simulation studies of protegrin-1 monomer and dimer in two different lipid bilayersVariation of the detergent-binding capacity and phospholipid content of membrane proteins when purified in different detergents.E. coli outer membrane and interactions with OmpLA.Role of Conserved Gly-Gly Pairs on the Periplasmic Side of LacY.Antimicrobial peptides in toroidal and cylindrical pores.Binding Site Recognition and Docking Dynamics of a Single Electron Transport Protein: Cytochrome c2Structural heterogeneity in transmembrane amyloid precursor protein homodimer is a consequence of environmental selection.The orientation and dynamics of estradiol and estradiol oleate in lipid membranes and HDL disc models.Structural and biophysical properties of a synthetic channel-forming peptide: designing a clinically relevant anion selective pore.Structural characterization of two pore-forming peptides: consequences of introducing a C-terminal tryptophanComputational investigation of cholesterol binding sites on mitochondrial VDAC.Predicting proton titration in cationic micelle and bilayer environments.CHARMM-GUI Membrane Builder toward realistic biological membrane simulations.Profiling the interaction mechanism of quinoline/quinazoline derivatives as MCHR1 antagonists: an in silico method.
P2860
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P2860
Automated builder and database of protein/membrane complexes for molecular dynamics simulations.
description
2007 nî lūn-bûn
@nan
2007 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած
@hyw
2007 թվականի սեպտեմբերին հրատարակված գիտական հոդված
@hy
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
name
Automated builder and database ...... olecular dynamics simulations.
@ast
Automated builder and database ...... olecular dynamics simulations.
@en
Automated builder and database ...... olecular dynamics simulations.
@nl
type
label
Automated builder and database ...... olecular dynamics simulations.
@ast
Automated builder and database ...... olecular dynamics simulations.
@en
Automated builder and database ...... olecular dynamics simulations.
@nl
prefLabel
Automated builder and database ...... olecular dynamics simulations.
@ast
Automated builder and database ...... olecular dynamics simulations.
@en
Automated builder and database ...... olecular dynamics simulations.
@nl
P2860
P921
P1433
P1476
Automated builder and database ...... olecular dynamics simulations.
@en
P2093
Sunhwan Jo
Taehoon Kim
P2860
P356
10.1371/JOURNAL.PONE.0000880
P407
P50
P577
2007-09-12T00:00:00Z