Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements. - Wikidata - wikimedia - TriplyDB

Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements.

Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements.

http://www.wikidata.org/entity/Q33369565

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LC-MS-based metabolomics MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data Retention projection enables accurate calculation of liquid chromatographic retention times across labs and methods Proteomics, lipidomics, metabolomics: a mass spectrometry tutorial from a computer scientist's point of view An Integrated Metabolomic and Genomic Mining Workflow To Uncover the Biosynthetic Potential of Bacteria Feasibility of identifying the tobacco-related global metabolome in blood by UPLC-QTOF-MS xMSanalyzer: automated pipeline for improved feature detection and downstream analysis of large-scale, non-targeted metabolomics data Profile-Based LC-MS data alignment--a Bayesian approach.Multi-profile Bayesian alignment model for LC-MS data analysis with integration of internal standards.A flexible statistical model for alignment of label-free proteomics data--incorporating ion mobility and product ion information The Effect of LC-MS Data Preprocessing Methods on the Selection of Plasma Biomarkers in Fed vs. Fasted Rats.In-depth evaluation of software tools for data-independent acquisition based label-free quantification.MetTailor: dynamic block summary and intensity normalization for robust analysis of mass spectrometry data in metabolomics.A hybrid retention time alignment algorithm for SWATH-MS data.Large-scale untargeted LC-MS metabolomics data correction using between-batch feature alignment and cluster-based within-batch signal intensity drift correction.Platforms and Pipelines for Proteomics Data Analysis and Management.Visualization, Quantification, and Alignment of Spectral Drift in Population Scale Untargeted Metabolomics Data.Metabolite signal identification in accurate mass metabolomics data with MZedDB, an interactive m/z annotation tool utilising predicted ionisation behaviour 'rules'.Characterization of 1H NMR spectroscopic data and the generation of synthetic validation sets.Mass spectrometry-based technologies for high-throughput metabolomics.Challenges in applying chemometrics to LC-MS-based global metabolite profile data.Label-free peptide profiling of Orbitrap™ full mass spectra.Generic workflow for quality assessment of quantitative label-free LC-MS analysis.Metabolomics applied to urine samples in childhood asthma; differentiation between asthma phenotypes and identification of relevant metabolites.From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web-resources for mass spectral plant metabolomics SCFIA: a statistical corresponding feature identification algorithm for LC/MS.PolyAlign: A Versatile LC-MS Data Alignment Tool for Landmark-Selected and -Automated Use.A new method for alignment of LC-MALDI-TOF data PeakLink: a new peptide peak linking method in LC-MS/MS using wavelet and SVM.Retention time alignment of LC/MS data by a divide-and-conquer algorithm.msCompare: a framework for quantitative analysis of label-free LC-MS data for comparative candidate biomarker studies.Prospects for a statistical theory of LC/TOFMS data.Bioinformatics Tools for Mass Spectroscopy-Based Metabolomic Data Processing and Analysis.Analytical approaches to metabolomics and applications to systems biology Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets An adaptive alignment algorithm for quality-controlled label-free LC-MS.Combining DI-ESI-MS and NMR datasets for metabolic profiling.Computational analyses of spectral trees from electrospray multi-stage mass spectrometry to aid metabolite identification (Post-)genomics approaches in fungal research.Incorporating peak grouping information for alignment of multiple liquid chromatography-mass spectrometry datasets

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P2860

Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements.

http://www.wikidata.org/entity/Q33369565

description

2008 nî lūn-bûn

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2008 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

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2008 թվականի սեպտեմբերին հրատարակված գիտական հոդված

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Critical assessment of alignme ...... and metabolomics measurements.

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Critical assessment of alignme ...... and metabolomics measurements.

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Critical assessment of alignme ...... and metabolomics measurements.

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Critical assessment of alignme ...... and metabolomics measurements.

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Critical assessment of alignme ...... and metabolomics measurements.

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Critical assessment of alignme ...... and metabolomics measurements.

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Critical assessment of alignme ...... and metabolomics measurements.

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Clemens Gröpl

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Eva Lange

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Ralf Tautenhahn

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P2860

Bioconductor: open software development for computational biology and bioinformatics

OpenMS - an open-source software framework for mass spectrometry

Critical assessment of methods of protein structure prediction-Round VII

Processing methods for differential analysis of LC/MS profile data

Mass spectrometry-based proteomics turns quantitative

Introduction to computational proteomics

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

Metabolome analysis of biosynthetic mutants reveals a diversity of metabolic changes and allows identification of a large number of new compounds in Arabidopsis.

Chromatographic alignment by warping and dynamic programming as a pre-processing tool for PARAFAC modelling of liquid chromatography-mass spectrometry data.

A software suite for the generation and comparison of peptide arrays from sets of data collected by liquid chromatography-mass spectrometry.

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9

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