Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq. - Wikidata - wikimedia - TriplyDB

Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq.

Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq.

http://www.wikidata.org/entity/Q33384868

about

Cistrome: an integrative platform for transcriptional regulation studies The Genomic HyperBrowser: inferential genomics at the sequence level Nucleosome-coupled expression differences in closely-related species Setd1a and NURF mediate chromatin dynamics and gene regulation during erythroid lineage commitment and differentiation Discovery and characterization of chromatin states for systematic annotation of the human genome PING 2.0: an R/Bioconductor package for nucleosome positioning using next-generation sequencing data.Inferring nucleosome positions with their histone mark annotation from ChIP data.Refined DNase-seq protocol and data analysis reveals intrinsic bias in transcription factor footprint identification.Next-generation technologies and data analytical approaches for epigenomics.Improved nucleosome-positioning algorithm iNPS for accurate nucleosome positioning from sequencing data.Characterizing nucleosome dynamics from genomic and epigenetic information using rule induction learning Learning a weighted sequence model of the nucleosome core and linker yields more accurate predictions in Saccharomyces cerevisiae and Homo sapiens.NF-E2, FLI1 and RUNX1 collaborate at areas of dynamic chromatin to activate transcription in mature mouse megakaryocytes PRDM9 binding organizes hotspot nucleosomes and limits Holliday junction migration.How cations can assist DNase I in DNA binding and hydrolysis.Sequence-dependent histone variant positioning signatures Nucleosome regulatory dynamics in response to TGFβ BINOCh: binding inference from nucleosome occupancy changes.Discover regulatory DNA elements using chromatin signatures and artificial neural network.The differential disease regulome Tight associations between transcription promoter type and epigenetic variation in histone positioning and modification.Identification of a QTL in Mus musculus for alcohol preference, withdrawal, and Ap3m2 expression using integrative functional genomics and precision genetics.Comparison of four ChIP-Seq analytical algorithms using rice endosperm H3K27 trimethylation profiling data.Nucleosome positioning: resources and tools online.Chromatin profiling reveals regulatory network shifts and a protective role for hepatocyte nuclear factor 4α during colitis.Comprehensive analysis of the palindromic motif TCTCGCGAGA: a regulatory element of the HNRNPK promoter.Nucleosome dynamics define transcriptional enhancers.Interrogating genomic and epigenomic data to understand prostate cancer Probabilistic inference for nucleosome positioning with MNase-based or sonicated short-read data.Kinetics of re-establishing H3K79 methylation marks in global human chromatin.Next-generation sequencing for cancer diagnostics: a practical perspective.DiNuP: a systematic approach to identify regions of differential nucleosome positioning.Bivalent-like chromatin markers are predictive for transcription start site distribution in human Active enhancers are delineated de novo during hematopoiesis, with limited lineage fidelity among specified primary blood cells.Differentiation-specific histone modifications reveal dynamic chromatin interactions and partners for the intestinal transcription factor CDX2 A wavelet approach to detect enriched regions and explore epigenomic landscapes.A histone arginine methylation localizes to nucleosomes in satellite II and III DNA sequences in the human genome NSeq: a multithreaded Java application for finding positioned nucleosomes from sequencing data H3.3-H4 tetramer splitting events feature cell-type specific enhancers.Maintenance of nucleosomal balance in cis by conserved AAA-ATPase Yta7.

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P2860

Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq.

http://www.wikidata.org/entity/Q33384868

description

2008 nî lūn-bûn

@nan

2008 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

@hyw

2008 թվականի նոյեմբերին հրատարակված գիտական հոդված

@hy

2008年の論文

@ja

2008年論文

@yue

2008年論文

@zh-hant

2008年論文

@zh-hk

2008年論文

@zh-mo

2008年論文

@zh-tw

2008年论文

@wuu

name

Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq.

@ast

Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq.

@en

type

label

Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq.

@ast

Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq.

@en

prefLabel

Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq.

@ast

Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq.

@en

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Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq.

@en

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Hyunjin Shin

http://www.w3.org/2001/XMLSchema#string

X Shirley Liu

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Ying Lei

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P2860

The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genome

Model-based analysis of ChIP-Seq (MACS)

Crystal structure of the nucleosome core particle at 2.8 A resolution

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.

A gene atlas of the mouse and human protein-encoding transcriptomes

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

Combinatorial patterns of histone acetylations and methylations in the human genome

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning

Statistical significance for genomewide studies

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