CORNET: a user-friendly tool for data mining and integration. - Wikidata - wikimedia - TriplyDB

CORNET: a user-friendly tool for data mining and integration.

CORNET: a user-friendly tool for data mining and integration.

http://www.wikidata.org/entity/Q33522353

about

Evolution and applications of plant pathway resources and databases Learning from Co-expression Networks: Possibilities and Challenges Evidence for intermolecular interactions between the intracellular domains of the arabidopsis receptor-like kinase ACR4, its homologs and the Wox5 transcription factor The potential of text mining in data integration and network biology for plant research: a case study on Arabidopsis Systematic identification of functional plant modules through the integration of complementary data sources Leaf responses to mild drought stress in natural variants of Arabidopsis.Engineering crassulacean acid metabolism to improve water-use efficiency RapaNet: A Web Tool for the Co-Expression Analysis of Brassica rapa Genes Transcriptome analysis reveals genes commonly induced by Botrytis cinerea infection, cold, drought and oxidative stresses in Arabidopsis.GeneFriends: a human RNA-seq-based gene and transcript co-expression database Diffany: an ontology-driven framework to infer, visualise and analyse differential molecular networks.MAGNET: MicroArray Gene expression and Network Evaluation Toolkit.First off the mark: early seed germination.Advances in omics and bioinformatics tools for systems analyses of plant functions.Comparative co-expression analysis in plant biology.Co-expression of cell-wall related genes: new tools and insights Systems analysis of plant functional, transcriptional, physical interaction, and metabolic networks.Co-expression and co-responses: within and beyond transcription.Network analysis for gene discovery in plant-specialized metabolism.CORNET 2.0: integrating plant coexpression, protein-protein interactions, regulatory interactions, gene associations and functional annotations.The reduction in maize leaf growth under mild drought affects the transition between cell division and cell expansion and cannot be restored by elevated gibberellic acid levels.Towards integration of population and comparative genomics in forest trees.Exploring Plant Co-Expression and Gene-Gene Interactions with CORNET 3.0.Molecular signatures in Arabidopsis thaliana in response to insect attack and bacterial infection.A subcellular localization compendium of hydrogen peroxide-induced proteins.Gene co-expression analyses: an overview from microarray collections in Arabidopsis thaliana.Contribution of the epigenetic mark H3K27me3 to functional divergence after whole genome duplication in Arabidopsis A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana.RALFL34 regulates formative cell divisions in Arabidopsis pericycle during lateral root initiation A generic tool for transcription factor target gene discovery in Arabidopsis cell suspension cultures based on tandem chromatin affinity purification.Arabidopsis ensemble reverse-engineered gene regulatory network discloses interconnected transcription factors in oxidative stress.Integrated omics analysis of specialized metabolism in medicinal plants.TF2Network: predicting transcription factor regulators and gene regulatory networks in Arabidopsis using publicly available binding site information.Comparative network analysis reveals that tissue specificity and gene function are important factors influencing the mode of expression evolution in Arabidopsis and rice.SHUGOSHINs and PATRONUS protect meiotic centromere cohesion in Arabidopsis thaliana.Predicting gene function from uncontrolled expression variation among individual wild-type Arabidopsis plants.MorphDB: Prioritizing Genes for Specialized Metabolism Pathways and Gene Ontology Categories in Plants.

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P2860

CORNET: a user-friendly tool for data mining and integration.

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description

2010 nî lūn-bûn

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2010 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2010 թվականի հունվարին հրատարակված գիտական հոդված

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2010年の論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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name

CORNET: a user-friendly tool for data mining and integration.

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CORNET: a user-friendly tool for data mining and integration.

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CORNET: a user-friendly tool for data mining and integration.

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CORNET: a user-friendly tool for data mining and integration.

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CORNET: a user-friendly tool for data mining and integration.

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CORNET: a user-friendly tool for data mining and integration.

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Plant Physiology

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CORNET: a user-friendly tool for data mining and integration.

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Diana Carvajal

http://www.w3.org/2001/XMLSchema#string

Joost Van den Cruyce

http://www.w3.org/2001/XMLSchema#string

Sara Movahedi

http://www.w3.org/2001/XMLSchema#string

Stefanie De Bodt

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P2860

Bioconductor: open software development for computational biology and bioinformatics

Cytoscape: a software environment for integrated models of biomolecular interaction networks

BioGRID: a general repository for interaction datasets

The Arabidopsis mutant sleepy1gar2-1 protein promotes plant growth by increasing the affinity of the SCFSLY1 E3 ubiquitin ligase for DELLA protein substrates

The Arabidopsis F-box protein SLEEPY1 targets gibberellin signaling repressors for gibberellin-induced degradation

IntAct: an open source molecular interaction database

InterPro: the integrative protein signature database

MINT: the Molecular INTeraction database

WoLF PSORT: protein localization predictor

Identification of brassinosteroid-related genes by means of transcript co-response analyses

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1167-1179

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scholarly article

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10.1104/PP.109.147215

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3

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20053712

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2832254

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