Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry. - Wikidata - wikimedia - TriplyDB

Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry.

Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry.

http://www.wikidata.org/entity/Q33639352

about

Mutant proteins as cancer-specific biomarkers Technical advances in proteomics: new developments in data-independent acquisition Graft-versus-host disease biomarkers: omics and personalized medicine Popular computational methods to assess multiprotein complexes derived from label-free affinity purification and mass spectrometry (AP-MS) experiments Precision medicine: from pharmacogenomics to pharmacoproteomics Characterizing the Escherichia coli O157:H7 proteome including protein associations with higher order assemblies A protein deep sequencing evaluation of metastatic melanoma tissues Open source libraries and frameworks for mass spectrometry based proteomics: a developer's perspective Salivary and pellicle proteome: A datamining analysis In vivo protein interaction network analysis reveals porin-localized antibiotic inactivation in Acinetobacter baumannii strain AB5075 The Exposed Proteomes of Brachyspira hyodysenteriae and B. pilosicoli Relative, label-free protein quantitation: Spectral counting error statistics from nine replicate MudPIT samples Mass Spectrometric Analysis of Lysine Ubiquitylation Reveals Promiscuity at Site Level Simultaneous Quantification of Viral Antigen Expression Kinetics Using Data-Independent (DIA) Mass Spectrometry.Independent highly sensitive characterization of asparagine deamidation and aspartic acid isomerization by sheathless CZE-ESI-MS/MS.15N-labeled brain enables quantification of proteome and phosphoproteome in cultured primary neurons.Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles)LFQuant: a label-free fast quantitative analysis tool for high-resolution LC-MS/MS proteomics data.ICan: an optimized ion-current-based quantification procedure with enhanced quantitative accuracy and sensitivity in biomarker discovery Maximizing peptide identification events in proteomic workflows using data-dependent acquisition (DDA).Mapping differential interactomes by affinity purification coupled with data-independent mass spectrometry acquisition.DeMix-Q: Quantification-Centered Data Processing Workflow.QC metrics from CPTAC raw LC-MS/MS data interpreted through multivariate statistics Intelligent data acquisition blends targeted and discovery methods.Systematic assessment of survey scan and MS2-based abundance strategies for label-free quantitative proteomics using high-resolution MS data.Variation and quantification among a target set of phosphopeptides in human plasma by multiple reaction monitoring and SWATH-MS2 data-independent acquisition Bioinformatic analysis of proteomics data.Comparison of data acquisition strategies on quadrupole ion trap instrumentation for shotgun proteomics.DIANA--algorithmic improvements for analysis of data-independent acquisition MS data.Extending the limits of quantitative proteome profiling with data-independent acquisition and application to acetaminophen-treated three-dimensional liver microtissues.MS1 Peptide Ion Intensity Chromatograms in MS2 (SWATH) Data Independent Acquisitions. Improving Post Acquisition Analysis of Proteomic Experiments.QPROT: Statistical method for testing differential expression using protein-level intensity data in label-free quantitative proteomics.Two methods for proteomic analysis of formalin-fixed, paraffin embedded tissue result in differential protein identification, data quality, and cost.Large-scale models of signal propagation in human cells derived from discovery phosphoproteomic data.Systematic evaluation of data-independent acquisition for sensitive and reproducible proteomics-a prototype design for a single injection assay.Implementation of statistical process control for proteomic experiments via LC MS/MS Comparative shotgun proteomics using spectral count data and quasi-likelihood modeling.Post-translational modifications of FDA-approved plasma biomarkers in glioblastoma samples.Proteomic analysis of Biomphalaria glabrata plasma proteins with binding affinity to those expressed by early developing larval Schistosoma mansoni Urine sample preparation in 96-well filter plates for quantitative clinical proteomics.

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P2860

Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry.

http://www.wikidata.org/entity/Q33639352

description

2010 nî lūn-bûn

@nan

2010 թուականի Փետրուարին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի փետրվարին հրատարակված գիտական հոդված

@hy

2010年の論文

@ja

2010年論文

@yue

2010年論文

@zh-hant

2010年論文

@zh-hk

2010年論文

@zh-mo

2010年論文

@zh-tw

2010年论文

@wuu

name

Repeatability and reproducibil ...... aphy-tandem mass spectrometry.

@ast

Repeatability and reproducibil ...... aphy-tandem mass spectrometry.

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type

label

Repeatability and reproducibil ...... aphy-tandem mass spectrometry.

@ast

Repeatability and reproducibil ...... aphy-tandem mass spectrometry.

@en

prefLabel

Repeatability and reproducibil ...... aphy-tandem mass spectrometry.

@ast

Repeatability and reproducibil ...... aphy-tandem mass spectrometry.

@en

P1433

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P1433

Journal of Proteome Research

P1476

Repeatability and reproducibil ...... aphy-tandem mass spectrometry.

@en

P2093

Amanda G Paulovich

http://www.w3.org/2001/XMLSchema#string

Amy-Joan L Ham

http://www.w3.org/2001/XMLSchema#string

Asokan Mulayath Variyath

http://www.w3.org/2001/XMLSchema#string

Birgit Schilling

http://www.w3.org/2001/XMLSchema#string

Bradford W Gibson

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Christopher R Kinsinger

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Cliff Spiegelman

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David M Bunk

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Dean D Billheimer

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Fred E Regnier

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P2860

MyriMatch: highly accurate tandem mass spectral peptide identification by multivariate hypergeometric analysis

Statistical methods for assessing agreement between two methods of clinical measurement

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

A model for random sampling and estimation of relative protein abundance in shotgun proteomics

Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database.

ProteoWizard: open source software for rapid proteomics tools development.

Post analysis data acquisition for the iterative MS/MS sampling of proteomics mixtures

Directed sample interrogation utilizing an accurate mass exclusion-based data-dependent acquisition strategy (AMEx).

IDPicker 2.0: Improved protein assembly with high discrimination peptide identification filtering.

Proteomic parsimony through bipartite graph analysis improves accuracy and transparency

P304

761-776

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10.1021/PR9006365

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2

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9

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P50

Daniel C. Liebler

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2010-02-01T00:00:00Z

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38097608

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P698

19921851

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P921

reproducibility

P932

2818771

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