Unique structural and stabilizing roles for the individual pseudouridine residues in the 1920 region of Escherichia coli 23S rRNA - Wikidata - wikimedia - TriplyDB

Unique structural and stabilizing roles for the individual pseudouridine residues in the 1920 region of Escherichia coli 23S rRNA

Unique structural and stabilizing roles for the individual pseudouridine residues in the 1920 region of Escherichia coli 23S rRNA

http://www.wikidata.org/entity/Q33689050

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A conserved pseudouridine modification in eukaryotic U2 snRNA induces a change in branch-site architecture Detection of pseudouridine and other modifications in tRNA by cyanoethylation and MALDI mass spectrometry.Solution structure of psi32-modified anticodon stem-loop of Escherichia coli tRNAPhe.Post-transcriptional nucleotide modification and alternative folding of RNA Effect of pseudouridylation on the structure and activity of the catalytically essential P6.1 hairpin in human telomerase RNA Structure modulation of helix 69 from Escherichia coli 23S ribosomal RNA by pseudouridylations Identification and characterization of the tRNA:Psi 31-synthase (Pus6p) of Saccharomyces cerevisiae.A mechanism for stop codon recognition by the ribosome: a bioinformatic approach.Optimization of ribosome structure and function by rRNA base modification Functional characterization of the YmcB and YqeV tRNA methylthiotransferases of Bacillus subtilis Impact of base pair identity 5' to the spliceosomal branch site adenosine on branch site conformation Investigation of Overhauser effects between pseudouridine and water protons in RNA helices.Methylation of the nucleobases in RNA oligonucleotides mediates duplex-hairpin conversion.Binding of aminoglycoside antibiotics to helix 69 of 23S rRNA 3-(3-amino-3-carboxypropyl)-5,6-dihydrouridine is one of two novel post-transcriptional modifications in tRNALys(UUU) from Trypanosoma brucei.A novel unanticipated type of pseudouridine synthase with homologs in bacteria, archaea, and eukarya.Modified nucleotides at the 5' end of human U2 snRNA are required for spliceosomal E-complex formation.Effects of nucleotide substitution and modification on the stability and structure of helix 69 from 28S rRNA Selection of heptapeptides that bind helix 69 of bacterial 23S ribosomal RNA 28S rRNA is inducibly pseudouridylated by the mTOR pathway translational control in CHO cell cultures The many facets of H/ACA ribonucleoproteins A counterintuitive Mg2+-dependent and modification-assisted functional folding of mitochondrial tRNAs Evidence That Antibiotics Bind to Human Mitochondrial Ribosomal RNA Has Implications for Aminoglycoside Toxicity.Identification of determinants in the protein partners aCBF5 and aNOP10 necessary for the tRNA:Psi55-synthase and RNA-guided RNA:Psi-synthase activities.RNA-guided isomerization of uridine to pseudouridine--pseudouridylation.Pseudouridine: still mysterious, but never a fake (uridine)!Identification and role of functionally important motifs in the 970 loop of Escherichia coli 16S ribosomal RNA.Combined in silico and experimental identification of the Pyrococcus abyssi H/ACA sRNAs and their target sites in ribosomal RNAs Combined Approaches to Site-Specific Modification of RNA Expanding the nucleotide repertoire of the ribosome with post-transcriptional modifications.Probing the stabilizing effects of modified nucleotides in the bacterial decoding region of 16S ribosomal RNA.Mass spectrometry of the fifth nucleoside: a review of the identification of pseudouridine in nucleic acids.Thermodynamic contribution and nearest-neighbor parameters of pseudouridine-adenosine base pairs in oligoribonucleotides.The contribution of pseudouridine to stabilities and structure of RNAs.Amino acid signature enables proteins to recognize modified tRNA.Highly conserved modified nucleosides influence Mg2+-dependent tRNA folding.Modulation of conformational changes in helix 69 mutants by pseudouridine modifications.The development of peptide ligands that target helix 69 rRNA of bacterial ribosomes.Comparison of solution conformations and stabilities of modified helix 69 rRNA analogs from bacteria and human An atlas of RNA base pairs involving modified nucleobases with optimal geometries and accurate energies.

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Unique structural and stabilizing roles for the individual pseudouridine residues in the 1920 region of Escherichia coli 23S rRNA

http://www.wikidata.org/entity/Q33689050

description

2000 nî lūn-bûn

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2000 թուականի Մայիսին հրատարակուած գիտական յօդուած

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2000 թվականի մայիսին հրատարակված գիտական հոդված

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2000年の論文

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2000年論文

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2000年論文

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Unique structural and stabiliz ...... n of Escherichia coli 23S rRNA

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Unique structural and stabiliz ...... n of Escherichia coli 23S rRNA

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Unique structural and stabiliz ...... n of Escherichia coli 23S rRNA

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Nucleic Acids Research

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Unique structural and stabiliz ...... n of Escherichia coli 23S rRNA

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P2093

C S Chow

http://www.w3.org/2001/XMLSchema#string

J Qiu

http://www.w3.org/2001/XMLSchema#string

J SantaLucia

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M Meroueh

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P J Grohar

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S A Scaringe

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P2860

X-ray crystal structures of 70S ribosome functional complexes

Investigation of the structural basis for thermodynamic stabilities of tandem GU mismatches: solution structure of (rGAGGUCUC)2 by two-dimensional NMR and simulated annealing

Stabilization of the anticodon stem-loop of tRNALys,3 by an A+-C base-pair and by pseudouridine

The numerous modified nucleotides in eukaryotic ribosomal RNA

Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts

Properties of pseudouridine N1 imino protons located in the major groove of an A-form RNA duplex

Structural characterization of U*-1915 in domain IV from Escherichia coli 23S ribosomal RNA as 3-methylpseudouridine

15N-labeled Escherichia coli tRNAfMet, tRNAGlu, tRNATyr, and tRNAPhe. Double resonance and two-dimensional NMR of N1-labeled pseudouridine.

Water: an integral part of nucleic acid structure.

Thermodynamics of RNA hairpins containing single internal mismatches

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2075-2083

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10.1093/NAR/28.10.2075

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10

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28

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279403993

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10773075

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105375

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