CPORT: a consensus interface predictor and its performance in prediction-driven docking with HADDOCK.
about
Computational prediction of protein interfaces: A review of data driven methodsIn silico modeling of human α2C-adrenoreceptor interaction with filamin-2The interaction of RNA helicase DDX3 with HIV-1 Rev-CRM1-RanGTP complex during the HIV replication cycleProgress and challenges in predicting protein interfacesCharacterization of ERM transactivation domain binding to the ACID/PTOV domain of the Mediator subunit MED25DockRank: Ranking docked conformations using partner-specific sequence homology-based protein interface predictionAlgorithmic approaches to protein-protein interaction site prediction.The Drosophila telomere-capping protein Verrocchio binds single-stranded DNA and protects telomeres from DNA damage response.Cryo-EM Data Are Superior to Contact and Interface Information in Integrative Modeling.Scoring docking conformations using predicted protein interfaces.miR-2909-mediated regulation of KLF4: a novel molecular mechanism for differentiating between B-cell and T-cell pediatric acute lymphoblastic leukemiasProtein docking prediction using predicted protein-protein interface.CONS-COCOMAPS: a novel tool to measure and visualize the conservation of inter-residue contacts in multiple docking solutionsIntegrative structural modeling with small angle X-ray scattering profiles.MTMDAT-HADDOCK: high-throughput, protein complex structure modeling based on limited proteolysis and mass spectrometryUpdates to the Integrated Protein-Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2.On the usefulness of ion-mobility mass spectrometry and SAXS data in scoring docking decoys.Protein docking with predicted constraints.VORFFIP-driven dock: V-D2OCK, a fast and accurate protein docking strategyCircadian Clock Gene CRY2 Degradation Is Involved in Chemoresistance of Colorectal Cancer.The Drosophila juvenile hormone receptor candidates methoprene-tolerant (MET) and germ cell-expressed (GCE) utilize a conserved LIXXL motif to bind the FTZ-F1 nuclear receptor.Predicted binding site information improves model ranking in protein docking using experimental and computer-generated target structures.Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasomeFusion Molecules of Heat Shock Protein HSPX with Other Antigens of Mycobacterium tuberculosis Show High Potential in Serodiagnosis of TuberculosisSequence Analysis and Evolutionary Studies of Reelin Proteins.A method for integrative structure determination of protein-protein complexes.A critical assessment of information-guided protein-protein docking predictionsInhibition of ovine in vitro fertilization by anti-Prt antibody: hypothetical model for Prt/ZP interactionPerformance of ZDOCK in CAPRI rounds 20-26.Integrative computational modeling of protein interactions.Computational evaluation of new homologous down regulators of Translationally Controlled Tumor Protein (TCTP) targeted for tumor reversion.Molecular characterization of HIV-1 Nef and ACOT8 interaction: insights from in silico structural predictions and in vitro functional assaysIdentification of a Substrate-selective Exosite within the Metalloproteinase Anthrax Lethal Factor.Oncogenic Receptor Tyrosine Kinases Directly Phosphorylate Focal Adhesion Kinase (FAK) as a Resistance Mechanism to FAK-Kinase Inhibitors.Rigid-Docking Approaches to Explore Protein-Protein Interaction Space.Great interactions: How binding incorrect partners can teach us about protein recognition and function.A Machine Learning Approach for Hot-Spot Detection at Protein-Protein Interfaces.DockStar: a novel ILP-based integrative method for structural modeling of multimolecular protein complexes.NPPD: A Protein-Protein Docking Scoring Function Based on Dyadic Differences in Networks of Hydrophobic and Hydrophilic Amino Acid Residues.SpotOn: High Accuracy Identification of Protein-Protein Interface Hot-Spots.
P2860
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P2860
CPORT: a consensus interface predictor and its performance in prediction-driven docking with HADDOCK.
description
2011 nî lūn-bûn
@nan
2011 թուականի Մարտին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի մարտին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
CPORT: a consensus interface p ...... n-driven docking with HADDOCK.
@ast
CPORT: a consensus interface p ...... n-driven docking with HADDOCK.
@en
type
label
CPORT: a consensus interface p ...... n-driven docking with HADDOCK.
@ast
CPORT: a consensus interface p ...... n-driven docking with HADDOCK.
@en
prefLabel
CPORT: a consensus interface p ...... n-driven docking with HADDOCK.
@ast
CPORT: a consensus interface p ...... n-driven docking with HADDOCK.
@en
P2860
P1433
P1476
CPORT: a consensus interface p ...... on-driven docking with HADDOCK
@en
P2093
Sjoerd J de Vries
P2860
P304
P356
10.1371/JOURNAL.PONE.0017695
P407
P577
2011-03-25T00:00:00Z