Gene movement by Helitron transposons contributes to the haplotype variability of maize - Wikidata - wikimedia - TriplyDB

Gene movement by Helitron transposons contributes to the haplotype variability of maize

Gene movement by Helitron transposons contributes to the haplotype variability of maize

http://www.wikidata.org/entity/Q33863231

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Empirical comparison of ab initio repeat finding programs A cornucopia of Helitrons shapes the maize genome Cisgenic plants are similar to traditionally bred plants: international regulations for genetically modified organisms should be altered to exempt cisgenesis Synteny analysis in Rosids with a walnut physical map reveals slow genome evolution in long-lived woody perennials Rolling-circle transposons catalyze genomic innovation in a mammalian lineage Transposable elements: powerful contributors to angiosperm evolution and diversity The predominantly selfing plant Arabidopsis thaliana experienced a recent reduction in transposable element abundance compared to its outcrossing relative Arabidopsis lyrata Automated paleontology of repetitive DNA with REANNOTATE Identification and characterization of lineage-specific genes within the Poaceae Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize DNA transposons and the evolution of eukaryotic genomes Maize haplotype with a helitron-amplified cytidine deaminase gene copy.TE-Locate: A Tool to Locate and Group Transposable Element Occurrences Using Paired-End Next-Generation Sequencing Data.Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content.Structure and architecture of the maize genome.Retrotranspositions in orthologous regions of closely related grass species Highly asymmetric rice genomes.Computational prediction and molecular confirmation of Helitron transposons in the maize genome Comparison of maize (Zea mays L.) F1-hybrid and parental inbred line primary root transcriptomes suggests organ-specific patterns of nonadditive gene expression and conserved expression trends.A link among DNA replication, recombination, and gene expression revealed by genetic and genomic analysis of TEBICHI gene of Arabidopsis thaliana.A comparative computational analysis of nonautonomous helitron elements between maize and rice A new method to compute K-mer frequencies and its application to annotate large repetitive plant genomes.Fragments of the key flowering gene GIGANTEA are associated with helitron-type sequences in the Pooideae grass Lolium perenne Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.Why assembling plant genome sequences is so challenging Somatic transposition and meiotically driven elimination of an active helitron family in Pleurotus ostreatus.A highly conserved gene island of three genes on chromosome 3B of hexaploid wheat: diverse gene function and genomic structure maintained in a tightly linked block.Recent amplification and impact of MITEs on the genome of grapevine (Vitis vinifera L.).Divergence of gene regulation through chromosomal rearrangements.Exceptional lability of a genomic complex in rice and its close relatives revealed by interspecific and intraspecific comparison and population analysis.A comparative genome analysis of Cercospora sojina with other members of the pathogen genus Mycosphaerella on different plant hosts.Helitrons contribute to the lack of gene colinearity observed in modern maize inbreds.HelitronScanner uncovers a large overlooked cache of Helitron transposons in many plant genomes.Patching gaps in plant genomes results in gene movement and erosion of colinearity Structural characterization of helitrons and their stepwise capturing of gene fragments in the maize genome.A genome-wide association study of the maize hypersensitive defense response identifies genes that cluster in related pathways.Expansion and evolution of the X-linked testis specific multigene families in the melanogaster species subgroup Uneven distribution of expressed sequence tag loci on maize pachytene chromosomes.Transposable elements and genome size variations in plants.Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor

P2860

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P2860

Gene movement by Helitron transposons contributes to the haplotype variability of maize

http://www.wikidata.org/entity/Q33863231

description

2005 nî lūn-bûn

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2005 թուականի Յունիսին հրատարակուած գիտական յօդուած

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2005 թվականի հունիսին հրատարակված գիտական հոդված

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2005年の論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年论文

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name

Gene movement by Helitron transposons contributes to the haplotype variability of maize

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Gene movement by Helitron transposons contributes to the haplotype variability of maize

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Gene movement by Helitron transposons contributes to the haplotype variability of maize

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Gene movement by Helitron transposons contributes to the haplotype variability of maize

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Gene movement by Helitron transposons contributes to the haplotype variability of maize

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Gene movement by Helitron transposons contributes to the haplotype variability of maize

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Proceedings of the National Academy of Sciences of the United States of America

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Gene movement by Helitron transposons contributes to the haplotype variability of maize

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Hugo K Dooner

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Jinsheng Lai

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Yubin Li

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P2860

Sequence, regulation, and evolution of the maize 22-kD alpha zein gene family

Rolling-circle transposons in eukaryotes

Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome

Enrichment of gene-coding sequences in maize by genome filtration.

A novel class of Helitron-related transposable elements in maize contain portions of multiple pseudogenes.

Maize genome sequencing by methylation filtration.

The role of barren stalk1 in the architecture of maize.

Recombination rates between adjacent genic and retrotransposon regions in maize vary by 2 orders of magnitude.

Treasures in the attic: rolling circle transposons discovered in eukaryotic genomes

Intraspecific violation of genetic colinearity and its implications in maize

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10.1073/PNAS.0502923102

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102

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