DNACLUST: accurate and efficient clustering of phylogenetic marker genes.
about
A new way to contemplate Darwin's tangled bank: how DNA barcodes are reconnecting biodiversity science and biomonitoringPrivacy-preserving microbiome analysis using secure computationEvolutionary histories of transposable elements in the genome of the largest living marsupial carnivore, the Tasmanian devilMicrobiota that affect risk for shigellosis in children in low-income countriesDiarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota compositionSurvey of culture, goldengate assay, universal biosensor assay, and 16S rRNA Gene sequencing as alternative methods of bacterial pathogen detectionReliable, verifiable and efficient monitoring of biodiversity via metabarcoding.Unraveling the outcome of 16S rDNA-based taxonomy analysis through mock data and simulations.MICCA: a complete and accurate software for taxonomic profiling of metagenomic data.MSClust: A Multi-Seeds based Clustering algorithm for microbiome profiling using 16S rRNA sequence.Negative binomial mixed models for analyzing microbiome count dataDifferential abundance analysis for microbial marker-gene surveys.Mining seasonal marine microbial pattern with greedy heuristic clustering and symmetrical nonnegative matrix factorization.The discriminant power of RNA features for pre-miRNA recognitionFrom reads to operational taxonomic units: an ensemble processing pipeline for MiSeq amplicon sequencing dataMicrofluidic-based mini-metagenomics enables discovery of novel microbial lineages from complex environmental samples.Deep sequencing of the oral microbiome reveals signatures of periodontal disease.Bioinformatics for the Human Microbiome Project.The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes.A comparison of methods for clustering 16S rRNA sequences into OTUs.Alignment-free supervised classification of metagenomes by recursive SVM.MtHc: a motif-based hierarchical method for clustering massive 16S rRNA sequences into OTUs.Toward accurate molecular identification of species in complex environmental samples: testing the performance of sequence filtering and clustering methodsImproved OTU-picking using long-read 16S rRNA gene amplicon sequencing and generic hierarchical clustering.Automatic learning of pre-miRNAs from different species.Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatmentBacterial and fungal core microbiomes associated with small grain silages during ensiling and aerobic spoilage.Groundwater Isolation Governs Chemistry and Microbial Community Structure along Hydrologic Flowpaths.Ultrafast clustering algorithms for metagenomic sequence analysis.Longitudinal analysis of the lung microbiota of cynomolgous macaques during long-term SHIV infection.Dynamics of genome change among Legionella speciesA systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity.A comprehensive evaluation of the sl1p pipeline for 16S rRNA gene sequencing analysis.A clinician's guide to microbiome analysis.DMclust, a Density-based Modularity Method for Accurate OTU Picking of 16S rRNA Sequences.Comparison of three clustering approaches for detecting novel environmental microbial diversity.Microenvironmental heterogeneity of gut compartments drives bacterial community structure in wood- and humus-feeding higher termites.Time-scales of hydrological forcing on the geochemistry and bacterial community structure of temperate peat soils.Swarm v2: highly-scalable and high-resolution amplicon clustering.Epigenomic k-mer dictionaries: shedding light on how sequence composition influences in vivo nucleosome positioning.
P2860
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P2860
DNACLUST: accurate and efficient clustering of phylogenetic marker genes.
description
2011 nî lūn-bûn
@nan
2011 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
DNACLUST: accurate and efficient clustering of phylogenetic marker genes.
@ast
DNACLUST: accurate and efficient clustering of phylogenetic marker genes.
@en
type
label
DNACLUST: accurate and efficient clustering of phylogenetic marker genes.
@ast
DNACLUST: accurate and efficient clustering of phylogenetic marker genes.
@en
prefLabel
DNACLUST: accurate and efficient clustering of phylogenetic marker genes.
@ast
DNACLUST: accurate and efficient clustering of phylogenetic marker genes.
@en
P2860
P356
P1433
P1476
DNACLUST: accurate and efficient clustering of phylogenetic marker genes.
@en
P2093
Mohammadreza Ghodsi
P2860
P2888
P356
10.1186/1471-2105-12-271
P50
P577
2011-06-30T00:00:00Z
P5875
P6179
1031473142