Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions. - Wikidata - wikimedia - TriplyDB

Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions.

Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions.

http://www.wikidata.org/entity/Q34083289

about

Structural and physico-chemical effects of disease and non-disease nsSNPs on proteins Phosphorylation by PINK1 releases the UBL domain and initializes the conformational opening of the E3 ubiquitin ligase Parkin Computational Design of the Affinity and Specificity of a Therapeutic T Cell Receptor Combining structural modeling with ensemble machine learning to accurately predict protein fold stability and binding affinity effects upon mutation Predicting Binding Free Energy Change Caused by Point Mutations with Knowledge-Modified MM/PBSA Method Determination of binding affinity upon mutation for type I dockerin-cohesin complexes from Clostridium thermocellum and Clostridium cellulolyticum using deep sequencing Mechismo: predicting the mechanistic impact of mutations and modifications on molecular interactions.Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment Data-driven models for protein interaction and design.Uncovering the determinants of a highly perturbed tyrosine pKa in the active site of ketosteroid isomerase.Inferring the microscopic surface energy of protein-protein interfaces from mutation data.Molecular Determinants of Mutant Phenotypes, Inferred from Saturation Mutagenesis Data Determining effects of non-synonymous SNPs on protein-protein interactions using supervised and semi-supervised learning.Protein-protein interface detection using the energy centrality relationship (ECR) characteristic of proteins Extending RosettaDock with water, sugar, and pH for prediction of complex structures and affinities for CAPRI rounds 20-27 Computational and experimental approaches to reveal the effects of single nucleotide polymorphisms with respect to disease diagnostics Cooperation of B cell lineages in induction of HIV-1-broadly neutralizing antibodies.The scoring of poses in protein-protein docking: current capabilities and future directions Integrating water exclusion theory into β contacts to predict binding free energy changes and binding hot spots SORTCERY-A High-Throughput Method to Affinity Rank Peptide Ligands.Deep mutational scanning: a new style of protein science High-resolution sequence-function mapping of full-length proteins.Co-Occurring Atomic Contacts for the Characterization of Protein Binding Hot Spots Blind prediction of interfacial water positions in CAPRI Deep Mutational Scans as a Guide to Engineering High Affinity T Cell Receptor Interactions with Peptide-bound Major Histocompatibility Complex.Insights from engineering the Affibody-Fc interaction with a computational-experimental method.MutaBind estimates and interprets the effects of sequence variants on protein-protein interactions.Performance of ZDOCK in CAPRI rounds 20-26.Enriching Traditional Protein-protein Interaction Networks with Alternative Conformations of Proteins.Modeling protein-protein and protein-peptide complexes: CAPRI 6th edition.A generalized framework for computational design and mutational scanning of T-cell receptor binding interfaces.Destabilization of the dimer interface is a common consequence of diverse ALS-associated mutations in metal free SOD1 AB-Bind: Antibody binding mutational database for computational affinity predictions.Folding of Protein Ions in the Gas Phase after Cation-to-Anion Proton-Transfer Reactions AbDesign: An algorithm for combinatorial backbone design guided by natural conformations and sequences.Structural Interface Forms and Their Involvement in Stabilization of Multidomain Proteins or Protein Complexes Using the concept of transient complex for affinity predictions in CAPRI rounds 20-27 and beyond.Systematic Identification of Machine-Learning Models Aimed to Classify Critical Residues for Protein Function from Protein Structure.Diabetes mellitus caused by mutations in human insulin: analysis of impaired receptor binding of insulins Wakayama, Los Angeles and Chicago using pharmacoinformatics.Score_set: a CAPRI benchmark for scoring protein complexes.

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P2860

Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions.

http://www.wikidata.org/entity/Q34083289

description

2013 nî lūn-bûn

@nan

2013 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2013 թվականի օգոստոսին հրատարակված գիտական հոդված

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2013年の論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年论文

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name

Community-wide evaluation of m ...... protein-protein interactions.

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Community-wide evaluation of m ...... protein-protein interactions.

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Community-wide evaluation of m ...... protein-protein interactions.

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type

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Community-wide evaluation of m ...... protein-protein interactions.

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Community-wide evaluation of m ...... protein-protein interactions.

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Community-wide evaluation of m ...... protein-protein interactions.

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Community-wide evaluation of m ...... protein-protein interactions.

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Community-wide evaluation of m ...... protein-protein interactions.

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Community-wide evaluation of m ...... protein-protein interactions.

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Alexandre M J J Bonvin

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Chaok Seok

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Daron M Standley

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David R Hall

http://www.w3.org/2001/XMLSchema#string

Dimitri Gillis

http://www.w3.org/2001/XMLSchema#string

Dmitri Beglov

http://www.w3.org/2001/XMLSchema#string

Dmitry Korkin

http://www.w3.org/2001/XMLSchema#string

Eiji Kanamori

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Genki Terashi

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Hahnbeom Park

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P2860

Protein stability promotes evolvability

Amino acid substitution matrices from protein blocks

Diversity of protein-protein interactions

Computational Design of Proteins Targeting the Conserved Stem Region of Influenza Hemagglutinin

Optimization of affinity, specificity and function of designed influenza inhibitors using deep sequencing

Principles of protein-protein interactions

Effective energy function for proteins in solution

CAPRI: a Critical Assessment of PRedicted Interactions

Are scoring functions in protein-protein docking ready to predict interactomes? Clues from a novel binding affinity benchmark

Energy functions that discriminate X-ray and near native folds from well-constructed decoys

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1980-1987

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10.1002/PROT.24356

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11

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81

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Jeffrey J. Gray

Juan Fernández-Recio

Huan-Xiang Zhou

Panagiotis L. Kastritis

Sarel J Fleishman

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2013-08-23T00:00:00Z

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23843247

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