Using hierarchical clustering of secreted protein families to classify and rank candidate effectors of rust fungi.
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Elucidating the Role of Effectors in Plant-Fungal Interactions: Progress and ChallengesComputational Prediction of Effector Proteins in Fungi: Opportunities and ChallengesChanging the Game: Using Integrative Genomics to Probe Virulence Mechanisms of the Stem Rust Pathogen Puccinia graminis f. sp. triticiEffector-Mining in the Poplar Rust Fungus Melampsora larici-populina SecretomeRepeat-containing protein effectors of plant-associated organismsA comparative genomic analysis of putative pathogenicity genes in the host-specific sibling species Colletotrichum graminicola and Colletotrichum sublineolaThe effector candidate repertoire of the arbuscular mycorrhizal fungus Rhizophagus clarusDifferential Communications between Fungi and Host Plants Revealed by Secretome Analysis of Phylogenetically Related Endophytic and Pathogenic FungiSecretome weaponries of Cochliobolus lunatus interacting with potato leaf at different temperature regimes reveal a CL[xxxx]LHM - motif.A Puccinia striiformis f. sp. tritici secreted protein activates plant immunity at the cell surface.Duplications and losses in gene families of rust pathogens highlight putative effectors.The ins and outs of rust haustoriaPatterns of genomic variation in the poplar rust fungus Melampsora larici-populina identify pathogenesis-related factorsSingle nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungusThe fungal pathogen Moniliophthora perniciosa has genes similar to plant PR-1 that are highly expressed during its interaction with cacaoAnnotation of a hybrid partial genome of the coffee rust (Hemileia vastatrix) contributes to the gene repertoire catalog of the Pucciniales.Proteomic properties reveal phyloecological clusters of Archaea.Improved gravitation field algorithm and its application in hierarchical clusteringGenome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors.Strategies for Wheat Stripe Rust Pathogenicity Identified by Transcriptome SequencingGenomic and transcriptomic differences in community acquired methicillin resistant Staphylococcus aureus USA300 and USA400 strains.A comparative hidden Markov model analysis pipeline identifies proteins characteristic of cereal-infecting fungi.Epigenetic control of effector gene expression in the plant pathogenic fungus Leptosphaeria maculans.Secretome analysis reveals effector candidates associated with broad host range necrotrophy in the fungal plant pathogen Sclerotinia sclerotiorum.The effect on the transcriptome of Anemone coronaria following infection with rust (Tranzschelia discolor).Advances and challenges in computational prediction of effectors from plant pathogenic fungi.A Comprehensive Analysis of the Transcriptomes of Marssonina brunnea and Infected Poplar Leaves to Capture Vital Events in Host-Pathogen Interactions.Small RNAs from the wheat stripe rust fungus (Puccinia striiformis f.sp. tritici).Candidate effector proteins of the necrotrophic apple canker pathogen Valsa mali can suppress BAX-induced PCD.Identification of promising host-induced silencing targets among genes preferentially transcribed in haustoria of Puccinia.Salivary proteins of spider mites suppress defenses in Nicotiana benthamiana and promote mite reproduction.Prediction of the in planta Phakopsora pachyrhizi secretome and potential effector families.Identification of Phakopsora pachyrhizi Candidate Effectors with Virulence Activity in a Distantly Related PathosystemSpecialization and utilization after hepatectomy in academic medical centers.Common protein sequence signatures associate with Sclerotinia borealis lifestyle and secretion in fungal pathogens of the Sclerotiniaceae.A Small Cysteine-Rich Protein from the Asian Soybean Rust Fungus, Phakopsora pachyrhizi, Suppresses Plant Immunity.A Large Family of AvrLm6-like Genes in the Apple and Pear Scab Pathogens, Venturia inaequalis and Venturia pirina.Comparative Analysis of Secretomes from Ectomycorrhizal Fungi with an Emphasis on Small-Secreted Proteins.Kingdom-Wide Analysis of Fungal Small Secreted Proteins (SSPs) Reveals their Potential Role in Host Association.The Genomes of Three Uneven Siblings: Footprints of the Lifestyles of Three Trichoderma Species.
P2860
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P2860
Using hierarchical clustering of secreted protein families to classify and rank candidate effectors of rust fungi.
description
2012 nî lūn-bûn
@nan
2012 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2012 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
Using hierarchical clustering ...... idate effectors of rust fungi.
@ast
Using hierarchical clustering ...... idate effectors of rust fungi.
@en
Using hierarchical clustering ...... idate effectors of rust fungi.
@nl
type
label
Using hierarchical clustering ...... idate effectors of rust fungi.
@ast
Using hierarchical clustering ...... idate effectors of rust fungi.
@en
Using hierarchical clustering ...... idate effectors of rust fungi.
@nl
prefLabel
Using hierarchical clustering ...... idate effectors of rust fungi.
@ast
Using hierarchical clustering ...... idate effectors of rust fungi.
@en
Using hierarchical clustering ...... idate effectors of rust fungi.
@nl
P2093
P2860
P50
P1433
P1476
Using hierarchical clustering ...... idate effectors of rust fungi.
@en
P2093
Diane G O Saunders
Liliana M Cano
P2860
P304
P356
10.1371/JOURNAL.PONE.0029847
P407
P577
2012-01-06T00:00:00Z