about
Concentration and length dependence of DNA looping in transcriptional regulationGeneral transfer matrix formalism to calculate DNA-protein-drug binding in gene regulation: application to OR operator of phageA biophysical model for analysis of transcription factor interaction and binding site arrangement from genome-wide binding dataLac repressor hinge flexibility and DNA looping: single molecule kinetics by tethered particle motionFirst-principles calculation of DNA looping in tethered particle experiments.Analysis of in-vivo LacR-mediated gene repression based on the mechanics of DNA looping.Multilevel deconstruction of the In vivo behavior of looped DNA-protein complexesGuidance for data collection and computational modelling of regulatory networksOn the spontaneous stochastic dynamics of a single gene: complexity of the molecular interplay at the promoter.Protein-induced DNA linking number change by sequence-specific DNA binding proteins and its biological effects.Comparison of the theoretical and real-world evolutionary potential of a genetic circuit.Modeling bistable cell-fate choices in the Drosophila eye: qualitative and quantitative perspectives.Design of the lac gene circuit revisited.Transcription by the numbers redux: experiments and calculations that surprise.Effects of nucleoid proteins on DNA repression loop formation in Escherichia coliSite-specific recombinatorics: in situ cellular barcoding with the Cre Lox systemSupercoiling Effects on Short-Range DNA Looping in E. coli.Variance-corrected Michaelis-Menten equation predicts transient rates of single-enzyme reactions and response times in bacterial gene-regulation.Biological consequences of tightly bent DNA: the other life of a macromolecular celebrity.Mapping the phase diagram of the writhe of DNA nanocircles using atomistic molecular dynamics simulationsStochastic dynamics of macromolecular-assembly networks.Systems biophysics of gene expression.DNA sequence-dependent mechanics and protein-assisted bending in repressor-mediated loop formation.Control of gene expression by modulated self-assembly.From structure to function of bacterial chromosomes: Evolutionary perspectives and ideas for new experiments.Structure-driven homology pairing of chromatin fibers: the role of electrostatics and protein-induced bridging.Accurate prediction of gene expression by integration of DNA sequence statistics with detailed modeling of transcription regulation.Ab initio thermodynamic modeling of distal multisite transcription regulation.Scaling of gene expression with transcription-factor fugacity.Supercoiling and denaturation of DNA loops.Theory on the dynamic memory in the transcription-factor-mediated transcription activation.Effect of supercoiling on formation of protein-mediated DNA loops.Stiffer double-stranded DNA in two-dimensional confinement due to bending anisotropy.
P2860
Q27349246-CAD33493-B461-41F9-9807-0B3573195AA4Q29029551-3A44F0FC-74EB-46CE-BC95-DE88C1248FCDQ30000980-C2E46CC6-A281-470D-85FA-9FE4F4704D78Q30477690-79E97281-95C0-4D13-8935-84E80500342CQ30508525-7C26F002-0123-4B65-B7C8-7C9B3C4E87A6Q33268304-B7382B0F-3243-4F97-83FB-B80076E5E86DQ33281009-A114D77D-CC93-4D79-AFA2-A3FC4A247BADQ33432897-F487EA36-9E9E-4E66-AFA3-E639E3392D9EQ33523145-3F4BC3F9-E14F-4B2B-BE65-09723C5E0965Q33639801-5020D80A-671A-462D-83B4-C97C7454546FQ33734356-3809B7B7-5D3A-4F01-8BB0-42E5877F12EDQ34122241-13678B79-CAF1-4B1E-8AC1-04F3750E8464Q35076513-2C5AF601-0782-4450-AC16-66BFA1A7DDFDQ35215820-D1812BC8-9C3D-4E58-B9BA-89FA5D58D1ABQ35891566-431A8F74-A83E-4E28-AC1E-09D5BF396559Q36065296-6849F374-D63D-4748-9170-11B9FD13DFE8Q36175103-CE7DE9A7-2893-4669-9143-D1F7E026697EQ36346263-E9F7C1E6-8980-4142-8FAA-9CF8F61D336BQ36395025-11DDBB30-C673-45A9-A3AF-83BC70C45E55Q36471398-CEC823FF-4495-4BC9-B100-C2C16E72DC0EQ36494123-947F6462-A13E-4671-AF56-36B5FF892ADAQ36939727-896E81D2-164D-412A-89E6-D9DE9FD37F7FQ37561098-AE94905B-D515-4E7C-B524-C193DCE3F5E7Q38319284-43DCBA05-9BC4-4095-BB44-5E2D7696756DQ38546696-32F2795F-BCD4-449F-AE72-0E538CB14202Q41993462-1A2DE618-B058-4D65-9DC4-C5AAC9878DB7Q42409694-F4A00320-CB29-4364-88EE-799F865AE00DQ42780215-98830174-A8A7-40FC-A460-F1EAB0A49233Q50162260-33D456D2-F6E5-4DE9-9FBF-A28158D51A94Q50638008-D047CF5F-36EE-4D04-856A-97BF37632051Q51007870-24E96E7C-0C32-48ED-B831-2F59CF03D489Q51071465-CE8840AF-F74B-4458-9B35-3D82D70C3335Q52755787-C3A389C1-8488-4EED-9961-EF86C3983353
P2860
description
2005 nî lūn-bûn
@nan
2005 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի նոյեմբերին հրատարակված գիտական հոդված
@hy
2005年の論文
@ja
2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
@zh-tw
2005年论文
@wuu
name
Inferring the in vivo looping properties of DNA.
@ast
Inferring the in vivo looping properties of DNA.
@en
Inferring the in vivo looping properties of DNA.
@nl
type
label
Inferring the in vivo looping properties of DNA.
@ast
Inferring the in vivo looping properties of DNA.
@en
Inferring the in vivo looping properties of DNA.
@nl
prefLabel
Inferring the in vivo looping properties of DNA.
@ast
Inferring the in vivo looping properties of DNA.
@en
Inferring the in vivo looping properties of DNA.
@nl
P2093
P2860
P356
P1476
Inferring the in vivo looping properties of DNA.
@en
P2093
J Miguel Rubi
Jose M G Vilar
Leonor Saiz
P2860
P304
17642-17645
P356
10.1073/PNAS.0505693102
P407
P577
2005-11-22T00:00:00Z
P5875
P698
P818
q-bio/0512036