In-depth annotation of SNPs arising from resequencing projects using NGS-SNP - Wikidata - wikimedia - TriplyDB

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

http://www.wikidata.org/entity/Q34194748

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Molecular Pathology and Personalized Medicine: The Dawn of a New Era in Companion Diagnostics-Practical Considerations about Companion Diagnostics for Non-Small-Cell-Lung-Cancer Current strategies for mutation detection in phenotype-driven screens utilising next generation sequencing High throughput sequencing approaches to mutation discovery in the mouse Dominant Red Coat Color in Holstein Cattle Is Associated with a Missense Mutation in the Coatomer Protein Complex, Subunit Alpha (COPA) Gene Novel gene function revealed by mouse mutagenesis screens for models of age-related disease.Deep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genes Massively parallel sequencing of Chikso (Korean brindle cattle) to discover genome-wide SNPs and InDels Rich annotation of DNA sequencing variants by leveraging the Ensembl Variant Effect Predictor with plugins.A comparative phenotypic and genomic analysis of C57BL/6J and C57BL/6N mouse strains.Re-sequencing data for refining candidate genes and polymorphisms in QTL regions affecting adiposity in chicken.Comparison among three variant callers and assessment of the accuracy of imputation from SNP array data to whole-genome sequence level in chicken.Whole-genome analyses of Korean native and Holstein cattle breeds by massively parallel sequencing.Discovery of Single Nucleotide Polymorphisms in Complex Genomes Using SGSautoSNP.Putative enhancer sites in the bovine genome are enriched with variants affecting complex traits.A genome-wide association study of immune response traits in Canadian Holstein cattle.Mitochondriome and cholangiocellular carcinoma Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery VPA: an R tool for analyzing sequencing variants with user-specified frequency pattern.Exome sequencing finds a novel PCSK1 mutation in a child with generalized malabsorptive diarrhea and diabetes insipidus VARIANT: Command Line, Web service and Web interface for fast and accurate functional characterization of variants found by Next-Generation Sequencing Genomic and transcriptome analyses reveal that MAPK- and phosphatidylinositol-signaling pathways mediate tolerance to 5-hydroxymethyl-2-furaldehyde for industrial yeast Saccharomyces cerevisiae Exome-assistant: a rapid and easy detection of disease-related genes and genetic variations from exome sequencing.Predicting the functional effect of amino acid substitutions and indels A survey of tools for variant analysis of next-generation genome sequencing data.Tool for rapid annotation of microbial SNPs (TRAMS): a simple program for rapid annotation of genomic variation in prokaryotes.Further delineation of the SATB2 phenotype.The South Asian genome.Consequences of splitting whole-genome sequencing effort over multiple breeds on imputation accuracy.Combined QTL and selective sweep mappings with coding SNP annotation and cis-eQTL analysis revealed PARK2 and JAG2 as new candidate genes for adiposity regulation.Genome-wide association and genomic prediction of breeding values for fatty acid composition in subcutaneous adipose and longissimus lumborum muscle of beef cattle Rare Variants in Transcript and Potential Regulatory Regions Explain a Small Percentage of the Missing Heritability of Complex Traits in Cattle.Whole genome sequencing of Guzerá cattle reveals genetic variants in candidate genes for production, disease resistance, and heat tolerance.Whole exome sequencing of microdissected splenic marginal zone lymphoma: a study to discover novel tumor-specific mutations.The identification of candidate genes and SNP markers for classical bovine spongiform encephalopathy susceptibility.Cis-regulatory architecture of a brain signaling center predates the origin of chordates.Combined immunodeficiency with life-threatening EBV-associated lymphoproliferative disorder in patients lacking functional CD27.Human islets contain four distinct subtypes of β cells Hyperglycaemia induces metabolic dysfunction and glycogen accumulation in pancreatic β-cells.Single nucleotide polymorphisms for feed efficiency and performance in crossbred beef cattle Livestock and the promise of genomics.

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In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

http://www.wikidata.org/entity/Q34194748

description

2011 nî lūn-bûn

@nan

2011 թուականի Յունիսին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի հունիսին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

@zh-hk

2011年論文

@zh-mo

2011年論文

@zh-tw

2011年论文

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name

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

@ast

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

@en

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

@nl

type

label

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

@ast

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

@en

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

@nl

prefLabel

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

@ast

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

@en

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

@nl

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In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

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Adriano S Arantes

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Jason R Grant

http://www.w3.org/2001/XMLSchema#string

Xiaoping Liao

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Entrez Gene: gene-centered information at NCBI

Ongoing and future developments at the Universal Protein Resource

KEGG for representation and analysis of molecular networks involving diseases and drugs

Mapping short DNA sequencing reads and calling variants using mapping quality scores

The Sequence Alignment/Map format and SAMtools

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap

SeqAnt: a web service to rapidly identify and annotate DNA sequence variations

SNPnexus: a web database for functional annotation of newly discovered and public domain single nucleotide polymorphisms.

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2300-2301

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10.1093/BIOINFORMATICS/BTR372

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16

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27

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21697123

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3150039

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