Atomically detailed folding simulation of the B domain of staphylococcal protein A from random structures.
about
Fast and faster: a designed variant of the B-domain of protein A folds in 3 microsecFolding pathway of the b1 domain of protein G explored by multiscale modelingMy 65 years in protein chemistryAutomated protein structure homology modeling: a progress report.Modification and optimization of the united-residue (UNRES) potential energy function for canonical simulations. I. Temperature dependence of the effective energy function and tests of the optimization method with single training proteins.Protein folding by zipping and assemblyFrom helix-coil transitions to protein folding.A test on peptide stability of AMBER force fields with implicit solvationBlind test of physics-based prediction of protein structures.An improved functional form for the temperature scaling factors of the components of the mesoscopic UNRES force field for simulations of protein structure and dynamics.Protein Folding and Structure Prediction from the Ground Up II: AAWSEM for α/β Proteins.Trends in template/fragment-free protein structure predictionCoarse-grained force field: general folding theory.Kinks, loops, and protein folding, with protein A as an example.Molecular dynamics of protein A and a WW domain with a united-residue model including hydrodynamic interactionMicrosecond folding dynamics of the F13W G29A mutant of the B domain of staphylococcal protein A by laser-induced temperature jump.Phylogeny of protein-folding trajectories reveals a unique pathway to native structure.Folding simulations of a de novo designed protein with a betaalphabeta fold.Accounting for a mirror-image conformation as a subtle effect in protein folding.Evidence, from simulations, of a single state with residual native structure at the thermal denaturation midpoint of a small globular proteinHigh-resolution protein folding with a transferable potential.All-Atom Internal Coordinate Mechanics (ICM) Force Field for Hexopyranoses and Glycoproteins.Hidden protein folding pathways in free-energy landscapes uncovered by network analysis.Relation between free energy landscapes of proteins and dynamics.Use of decoys to optimize an all-atom force field including hydration.Exploring the parameter space of the coarse-grained UNRES force field by random search: selecting a transferable medium-resolution force field.An all-atom force field for tertiary structure prediction of helical proteins.Folding processes of the B domain of protein A to the native state observed in all-atom ab initio folding simulations.Two-stage folding of HP-35 from ab initio simulationsDevelopment of a new physics-based internal coordinate mechanics force field and its application to protein loop modeling.An evolutionary strategy for all-atom folding of the 60-amino-acid bacterial ribosomal protein l20.A free-energy approach for all-atom protein simulation.Folding of Top7 in unbiased all-atom Monte Carlo simulations.The complex folding pathways of protein A suggest a multiple-funnelled energy landscapeDetermination method of the balance of the secondary-structure-forming tendencies of force fields
P2860
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P2860
Atomically detailed folding simulation of the B domain of staphylococcal protein A from random structures.
description
2003 nî lūn-bûn
@nan
2003 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած
@hyw
2003 թվականի նոյեմբերին հրատարակված գիտական հոդված
@hy
2003年の論文
@ja
2003年論文
@yue
2003年論文
@zh-hant
2003年論文
@zh-hk
2003年論文
@zh-mo
2003年論文
@zh-tw
2003年论文
@wuu
name
Atomically detailed folding si ...... tein A from random structures.
@ast
Atomically detailed folding si ...... tein A from random structures.
@en
Atomically detailed folding si ...... tein A from random structures.
@nl
type
label
Atomically detailed folding si ...... tein A from random structures.
@ast
Atomically detailed folding si ...... tein A from random structures.
@en
Atomically detailed folding si ...... tein A from random structures.
@nl
prefLabel
Atomically detailed folding si ...... tein A from random structures.
@ast
Atomically detailed folding si ...... tein A from random structures.
@en
Atomically detailed folding si ...... tein A from random structures.
@nl
P2860
P356
P1476
Atomically detailed folding si ...... tein A from random structures.
@en
P2093
Daniel R Ripoll
Jorge A Vila
P2860
P304
14812-14816
P356
10.1073/PNAS.2436463100
P407
P577
2003-11-24T00:00:00Z