Improvement of oligonucleotide probe design criteria for functional gene microarrays in environmental applications
about
Empirical evaluation of a new method for calculating signal-to-noise ratio for microarray data analysis.A high-throughput pipeline for designing microarray-based pathogen diagnostic assays.Spatial scaling of functional gene diversity across various microbial taxa.Design and analysis of mismatch probes for long oligonucleotide microarraysIn silico microarray probe design for diagnosis of multiple pathogens.sigReannot: an oligo-set re-annotation pipeline based on similarities with the Ensembl transcripts and Unigene clusters.Afforestation alters the composition of functional genes in soil and biogeochemical processes in South American grasslands.Effects of soil type and farm management on soil ecological functional genes and microbial activities.GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity.Dynamic probe selection for studying microbial transcriptome with high-density genomic tiling microarrays.Evaluating the performance of oligonucleotide microarrays for bacterial strains with increasing genetic divergence from the reference strainMetatranscriptome analysis of the human fecal microbiota reveals subject-specific expression profiles, with genes encoding proteins involved in carbohydrate metabolism being dominantly expressedStochastic assembly leads to alternative communities with distinct functions in a bioreactor microbial communityGeoChip 4: a functional gene-array-based high-throughput environmental technology for microbial community analysis.Development of HuMiChip for functional profiling of human microbiomesIdentification of non-specific hybridization using an empirical equation fitted to non-equilibrium dissociation curves.Thermodynamically optimal whole-genome tiling microarray design and validationUse of functional gene arrays for elucidating in situ biodegradation.Enhanced decomposition of stable soil organic carbon and microbial catabolic potentials by long-term field warming.In situ-synthesized virulence and marker gene biochip for detection of bacterial pathogens in water.Physico-chemical foundations underpinning microarray and next-generation sequencing experiments.Strain/species-specific probe design for microbial identification microarraysThe PathoChip, a functional gene array for assessing pathogenic properties of diverse microbial communities.Detecting unknown sequences with DNA microarrays: explorative probe design strategies.Development of highly fluorescent silica nanoparticles chemically doped with organic dye for sensitive DNA microarray detection.Development and validation of a species-independent functional gene microarray that targets lactic acid bacteriaDevelopment and applications of functional gene microarrays in the analysis of the functional diversity, composition, and structure of microbial communities
P2860
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P2860
Improvement of oligonucleotide probe design criteria for functional gene microarrays in environmental applications
description
2006 nî lūn-bûn
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2006 թուականի Փետրուարին հրատարակուած գիտական յօդուած
@hyw
2006 թվականի փետրվարին հրատարակված գիտական հոդված
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2006年の論文
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2006年学术文章
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2006年学术文章
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2006年学术文章
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2006年学术文章
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2006年学术文章
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2006年學術文章
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name
Improvement of oligonucleotide ...... in environmental applications
@ast
Improvement of oligonucleotide ...... in environmental applications
@en
Improvement of oligonucleotide ...... in environmental applications
@nl
type
label
Improvement of oligonucleotide ...... in environmental applications
@ast
Improvement of oligonucleotide ...... in environmental applications
@en
Improvement of oligonucleotide ...... in environmental applications
@nl
prefLabel
Improvement of oligonucleotide ...... in environmental applications
@ast
Improvement of oligonucleotide ...... in environmental applications
@en
Improvement of oligonucleotide ...... in environmental applications
@nl
P2093
P2860
P1476
Improvement of oligonucleotide ...... in environmental applications
@en
P2093
Christopher W Schadt
Jizhong Zhou
Jost Liebich
Song C Chong
Sung-Keun Rhee
P2860
P304
P356
10.1128/AEM.72.2.1688-1691.2006
P407
P577
2006-02-01T00:00:00Z