Protein interface classification by evolutionary analysis. - Wikidata - wikimedia - TriplyDB

Protein interface classification by evolutionary analysis.

Protein interface classification by evolutionary analysis.

http://www.wikidata.org/entity/Q34520325

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Understanding the fabric of protein crystals: computational classification of biological interfaces and crystal contacts A type IV translocated Legionella cysteine phytase counteracts intracellular growth restriction by phytate Design, construction, and characterization of a second-generation DARPin library with reduced hydrophobicity Crystal structures of Trypanosoma brucei oligopeptidase B broaden the paradigm of catalytic regulation in prolyl oligopeptidase family enzymes Structural basis for -10 promoter element melting by environmentally induced sigma factors Combined inhibition of caspase 3 and caspase 7 by two highly selective DARPins slows down cellular demise Conformational transitions driven by pyridoxal-5'-phosphate uptake in the psychrophilic serine hydroxymethyltransferase from Psychromonas ingrahamii Crystal Structure of the Escherichia coli Fic Toxin-Like Protein in Complex with Its Cognate Antitoxin Some of the most interesting CASP11 targets through the eyes of their authors Probing the influence of non-covalent contact networks identified by charge density analysis on the oxidoreductase BacC.Protein-protein interface detection using the energy centrality relationship (ECR) characteristic of proteins How periplasmic thioredoxin TlpA reduces bacterial copper chaperone ScoI and cytochrome oxidase subunit II (CoxB) prior to metallation.A PDB-wide, evolution-based assessment of protein-protein interfaces.An analysis of oligomerization interfaces in transmembrane proteins.Structure of Csd3 from Helicobacter pylori, a cell shape-determining metallopeptidase.Use B-factor related features for accurate classification between protein binding interfaces and crystal packing contacts GTP-Dependent K-Ras Dimerization Genome and network visualization facilitates the analyses of the effects of drugs and mutations on protein-protein and drug-protein networks.A structural dissection of large protein-protein crystal packing contacts.Structural Modeling of GR Interactions with the SWI/SNF Chromatin Remodeling Complex and C/EBP Oligomerization as a strategy for cold adaptation: Structure and dynamics of the GH1 β-glucosidase from Exiguobacterium antarcticum B7.Exploiting conformational ensembles in modeling protein-protein interactions on the proteome scale.Structural basis and function of XRN2 binding by XTB domains Functional map of arrestin binding to phosphorylated opsin, with and without agonist.Structural Insights into the Drosophila melanogaster Retinol Dehydrogenase, a Member of the Short-Chain Dehydrogenase/Reductase Family.Functional map of arrestin-1 at single amino acid resolution The crystal structure of the Sgt1-Skp1 complex: the link between Hsp90 and both SCF E3 ubiquitin ligases and kinetochores.New additions to the ClusPro server motivated by CAPRI.JET2 Viewer: a database of predicted multiple, possibly overlapping, protein-protein interaction sites for PDB structures.Modeling protein quaternary structure of homo- and hetero-oligomers beyond binary interactions by homology.Structural templates for modeling homodimers.Expression and Structural Analyses of Human DNA Polymerase θ (POLQ).Effective discrimination between biologically relevant contacts and crystal packing contacts using new determinants.Role of the nucleotidyl cyclase helical domain in catalytically active dimer formation.Assessment of protein assembly prediction in CASP12.Assessment of data-assisted prediction by inclusion of crosslinking/mass-spectrometry and small angle X-ray scattering data in the 12th Critical Assessment of protein Structure Prediction experiment.Identifying Functionally Informative Evolutionary Sequence Profiles.PDB-wide identification of biological assemblies from conserved quaternary structure geometry.Crystal structures of eukaryote glycosyltransferases reveal biologically relevant enzyme homooligomers.Trapped intermediate state of plant pyruvate phosphate dikinase indicates substeps in catalytic swiveling domain mechanism.

P2860

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P2860

Protein interface classification by evolutionary analysis.

http://www.wikidata.org/entity/Q34520325

description

2012 nî lūn-bûn

@nan

2012 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

@zh-hant

2012年論文

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2012年論文

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2012年論文

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2012年论文

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name

Protein interface classification by evolutionary analysis.

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Protein interface classification by evolutionary analysis.

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Protein interface classification by evolutionary analysis.

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type

label

Protein interface classification by evolutionary analysis.

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Protein interface classification by evolutionary analysis.

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Protein interface classification by evolutionary analysis.

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prefLabel

Protein interface classification by evolutionary analysis.

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Protein interface classification by evolutionary analysis.

@en

Protein interface classification by evolutionary analysis.

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BMC Bioinformatics

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Protein interface classification by evolutionary analysis.

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P2093

Adam Srebniak

http://www.w3.org/2001/XMLSchema#string

Guido Capitani

http://www.w3.org/2001/XMLSchema#string

Martin A Schärer

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P2860

An allosteric mechanism for activation of the kinase domain of epidermal growth factor receptor

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

The protein common interface database (ProtCID)--a comprehensive database of interactions of homologous proteins in multiple crystal forms

Statistical analysis of interface similarity in crystals of homologous proteins

NOXclass: prediction of protein-protein interaction types.

Structure of the epidermal growth factor receptor kinase domain alone and in complex with a 4-anilinoquinazoline inhibitor

Structural basis for substrate delivery by acyl carrier protein in the yeast fatty acid synthase

Crystal structure of the channelrhodopsin light-gated cation channel

Immuno- and constitutive proteasome crystal structures reveal differences in substrate and inhibitor specificity

Inference of macromolecular assemblies from crystalline state

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1471-2105-13-334

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334

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10.1186/1471-2105-13-334

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