Bioinformatics-enabled identification of the HrpL regulon and type III secretion system effector proteins of Pseudomonas syringae pv. phaseolicola 1448A.
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Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomesTranscriptome analysis of Pseudomonas syringae identifies new genes, noncoding RNAs, and antisense activitySequence-based prediction of type III secreted proteinsComputational prediction of type III and IV secreted effectors in gram-negative bacteriaExploiting pathogens' tricks of the trade for engineering of plant disease resistance: challenges and opportunities.Characterization of the PvdS-regulated promoter motif in Pseudomonas syringae pv. tomato DC3000 reveals regulon members and insights regarding PvdS function in other pseudomonads.Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro.Accurate prediction of secreted substrates and identification of a conserved putative secretion signal for type III secretion systemsPrediction of type III secretion signals in genomes of gram-negative bacteria.Transcriptional profile of Pseudomonas syringae pv. phaseolicola NPS3121 in response to tissue extracts from a susceptible Phaseolus vulgaris L. cultivar.Computational prediction of type III secreted proteins from gram-negative bacteriaGenome sequence analyses of Pseudomonas savastanoi pv. glycinea and subtractive hybridization-based comparative genomics with nine pseudomonads.The stealth episome: suppression of gene expression on the excised genomic island PPHGI-1 from Pseudomonas syringae pv. phaseolicolaSequence and role in virulence of the three plasmid complement of the model tumor-inducing bacterium Pseudomonas savastanoi pv. savastanoi NCPPB 3335.Genetic analysis of the individual contribution to virulence of the type III effector inventory of Pseudomonas syringae pv. phaseolicolaFunctional and computational analysis of amino acid patterns predictive of type III secretion system substrates in Pseudomonas syringae.Characterization of five ECF sigma factors in the genome of Pseudomonas syringae pv. syringae B728aComparative genomics and functional analysis of niche-specific adaptation in Pseudomonas putida.Variable suites of non-effector genes are co-regulated in the type III secretion virulence regulon across the Pseudomonas syringae phylogeny.The conserved upstream region of lscB/C determines expression of different levansucrase genes in plant pathogen Pseudomonas syringae.Global analysis of the HrpL regulon in the plant pathogen Pseudomonas syringae pv. tomato DC3000 reveals new regulon members with diverse functions.Identification of Pseudomonas syringae pv. syringae 61 type III secretion system Hrp proteins that can travel the type III pathway and contribute to the translocation of effector proteins into plant cells.Disruption of the carA gene in Pseudomonas syringae results in reduced fitness and alters motilityEffect of iron concentration on the growth rate of Pseudomonas syringae and the expression of virulence factors in hrp-inducing minimal medium.Mining the genomes of plant pathogenic bacteria: how not to drown in gigabases of sequence.Pseudomonas syringae pv. phaseolicola: from 'has bean' to supermodel.Microbial genome-enabled insights into plant-microorganism interactions.E622, a miniature, virulence-associated mobile element.HopX1 in Erwinia amylovora functions as an avirulence protein in apple and is regulated by HrpL.The ECF sigma factor, PSPTO_1043, in Pseudomonas syringae pv. tomato DC3000 is induced by oxidative stress and regulates genes involved in oxidative stress response.Identification of novel Xanthomonas euvesicatoria type III effector proteins by a machine-learning approach.Analysis of the role of the type III effector inventory of Pseudomonas syringae pv. phaseolicola 1448a in interaction with the plant.Analysis of the small RNA P16/RgsA in the plant pathogen Pseudomonas syringae pv. tomato strain DC3000.An account of in silico identification tools of secreted effector proteins in bacteria and future challenges.Genetic characterization of the HrpL regulon of the fire blight pathogen Erwinia amylovora reveals novel virulence factors.The Ca2+ induced two-component system, CvsSR regulates the Type III secretion system and the extracytoplasmic function sigma-factor AlgU in Pseudomonas syringae pv. tomato DC3000.LOV-domain photoreceptor, encoded in a genomic island, attenuates the virulence of Pseudomonas syringae in light-exposed Arabidopsis leaves.Comparative analysis of metabolic networks provides insight into the evolution of plant pathogenic and nonpathogenic lifestyles in Pseudomonas.
P2860
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P2860
Bioinformatics-enabled identification of the HrpL regulon and type III secretion system effector proteins of Pseudomonas syringae pv. phaseolicola 1448A.
description
2006 nî lūn-bûn
@nan
2006 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած
@hyw
2006 թվականի նոյեմբերին հրատարակված գիտական հոդված
@hy
2006年の論文
@ja
2006年論文
@yue
2006年論文
@zh-hant
2006年論文
@zh-hk
2006年論文
@zh-mo
2006年論文
@zh-tw
2006年论文
@wuu
name
Bioinformatics-enabled identif ...... ringae pv. phaseolicola 1448A.
@ast
Bioinformatics-enabled identif ...... ringae pv. phaseolicola 1448A.
@en
Bioinformatics-enabled identif ...... ringae pv. phaseolicola 1448A.
@nl
type
label
Bioinformatics-enabled identif ...... ringae pv. phaseolicola 1448A.
@ast
Bioinformatics-enabled identif ...... ringae pv. phaseolicola 1448A.
@en
Bioinformatics-enabled identif ...... ringae pv. phaseolicola 1448A.
@nl
prefLabel
Bioinformatics-enabled identif ...... ringae pv. phaseolicola 1448A.
@ast
Bioinformatics-enabled identif ...... ringae pv. phaseolicola 1448A.
@en
Bioinformatics-enabled identif ...... ringae pv. phaseolicola 1448A.
@nl
P2093
P50
P356
P1476
Bioinformatics-enabled identif ...... ringae pv. phaseolicola 1448A.
@en
P2093
Alan Collmer
C Robin Buell
David S Guttman
Genevieve A DeClerck
James R Alfano
John Stavrinides
John W Mansfield
Monica Vencato
Philip A Bronstein
P304
P356
10.1094/MPMI-19-1193
P577
2006-11-01T00:00:00Z