Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil. - Wikidata - wikimedia - TriplyDB

Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil.

Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil.

http://www.wikidata.org/entity/Q34683148

about

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes Occupancy modeling, maximum contig size probabilities and designing metagenomics experiments Distinct microbial communities within the endosphere and rhizosphere of Populus deltoides roots across contrasting soil types Discovery of a novel single-stranded DNA virus from a sea turtle fibropapilloma by using viral metagenomics Freshwater Metaviromics and Bacteriophages: A Current Assessment of the State of the Art in Relation to Bioinformatic Challenges Insights into novel antimicrobial compounds and antibiotic resistance genes from soil metagenomes Temporal and Spatial Distribution of the Microbial Community of Winogradsky Columns Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function Fungal diversity is not determined by mineral and chemical differences in serpentine substrates Environmental and Geographical Factors Structure Soil Microbial Diversity in New Caledonian Ultramafic Substrates: A Metagenomic Approach Metacommunity analysis of amoeboid protists in grassland soils Metagenomic analysis of a southern maritime antarctic soil The dynamic genetic repertoire of microbial communities Specific impacts of beech and Norway spruce on the structure and diversity of the rhizosphere and soil microbial communities Optimization of viral resuspension methods for carbon-rich soils along a permafrost thaw gradient Identification of species by multiplex analysis of variable-length sequences Signal processing for metagenomics: extracting information from the soup.Elevated atmospheric CO2 stimulates soil fungal diversity through increased fine root production in a semiarid shrubland ecosystem.A Polyglot Approach to Bioinformatics Data Integration: A Phylogenetic Analysis of HIV-1 Distinct Biogeographic Patterns for Archaea, Bacteria, and Fungi along the Vegetation Gradient at the Continental Scale in Eastern China.Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome.Amplification of uncultured single-stranded DNA viruses from rice paddy soil Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing.Metagenomics approaches in systems microbiology.Characterization of airborne microbial communities at a high-elevation site and their potential to act as atmospheric ice nuclei Afforestation alters the composition of functional genes in soil and biogeochemical processes in South American grasslands.454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity.Environmental distribution of prokaryotic taxa.Development of an environmental functional gene microarray for soil microbial communities.Identifying active phage lysins through functional viral metagenomics.Impact of transgenic wheat with wheat yellow mosaic virus resistance on microbial community diversity and enzyme activity in rhizosphere soil.Size Does Matter: Application-driven Approaches for Soil Metagenomics.Examining the global distribution of dominant archaeal populations in soil Metagenomic analysis of the viral communities in fermented foods.Interplay of metagenomics and in vitro compartmentalization.Soil-specific limitations for access and analysis of soil microbial communities by metagenomics.Active and total microbial communities in forest soil are largely different and highly stratified during decomposition Using network analysis to explore co-occurrence patterns in soil microbial communities Amplification methods bias metagenomic libraries of uncultured single-stranded and double-stranded DNA viruses.

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P2860

Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil.

http://www.wikidata.org/entity/Q34683148

description

2007 nî lūn-bûn

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2007 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

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2007 թվականի սեպտեմբերին հրատարակված գիտական հոդված

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2007年の論文

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2007年論文

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2007年論文

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2007年论文

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Applied and Environmental Microbiology

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Ben Felts

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James Nulton

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Peter Salamon

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P2860

Toward a census of bacteria in soil

How Many Species Are There on Earth?

Prokaryotes: the unseen majority

Obesity alters gut microbial ecology

Estimating prokaryotic diversity and its limits

The Phage Proteomic Tree: a genome-based taxonomy for phage

Genomic analysis of uncultured marine viral communities

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information

FastGroupII: a web-based bioinformatics platform for analyses of large 16S rDNA libraries

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7059-7066

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scholarly article

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10.1128/AEM.00358-07

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21

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73

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Catherine A. Lozupone

Michael Robeson

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