High resolution mapping of Twist to DNA in Drosophila embryos: Efficient functional analysis and evolutionary conservation. - Wikidata - wikimedia - TriplyDB

High resolution mapping of Twist to DNA in Drosophila embryos: Efficient functional analysis and evolutionary conservation.

High resolution mapping of Twist to DNA in Drosophila embryos: Efficient functional analysis and evolutionary conservation.

http://www.wikidata.org/entity/Q34729636

about

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia Lateral gene expression in Drosophila early embryos is supported by Grainyhead-mediated activation and tiers of dorsally-localized repression.Sequencing depth and coverage: key considerations in genomic analyses.CTF: a CRF-based transcription factor binding sites finding system.Genome-wide screens for in vivo Tinman binding sites identify cardiac enhancers with diverse functional architectures.Dynamic shifts in occupancy by TAL1 are guided by GATA factors and drive large-scale reprogramming of gene expression during hematopoiesis.Drosophila functional elements are embedded in structurally constrained sequences.An evolutionarily conserved DNA architecture determines target specificity of the TWIST family bHLH transcription factors.ChIP-nexus enables improved detection of in vivo transcription factor binding footprints.The presence of nuclear cactus in the early Drosophila embryo may extend the dynamic range of the dorsal gradient Transcription factor redundancy and tissue-specific regulation: evidence from functional and physical network connectivity.Twist1 mediates repression of chondrogenesis by β-catenin to promote cranial bone progenitor specification.A Clinical Indications Prediction Scale Based on TWIST1 for Human Mesenchymal Stem Cells.Quantitative perturbation-based analysis of gene expression predicts enhancer activity in early Drosophila embryo.Deciphering the molecular mechanisms underlying the binding of the TWIST1/E12 complex to regulatory E-box sequences.Genome-wide identification of Drosophila dorso-ventral enhancers by differential histone acetylation analysis.Stepwise Progression of Embryonic Patterning Drosophila poised enhancers are generated during tissue patterning with the help of repression.Encoding anatomy: developmental gene regulatory networks and morphogenesis.Complex interactions between cis-regulatory modules in native conformation are critical for Drosophila snail expression.Broadly expressed repressors integrate patterning across orthogonal axes in embryos.Su(H)-mediated repression positions gene boundaries along the dorsal-ventral axis of Drosophila embryos.Use of a Drosophila genome-wide conserved sequence database to identify functionally related cis-regulatory enhancers.Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization.Autoregulatory feedback controls sequential action of cis-regulatory modules at the brinker locus.TWIST1 upregulates the MAGEA4 oncogene.

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High resolution mapping of Twist to DNA in Drosophila embryos: Efficient functional analysis and evolutionary conservation.

http://www.wikidata.org/entity/Q34729636

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2011 nî lūn-bûn

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2011 թուականի Մարտին հրատարակուած գիտական յօդուած

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2011 թվականի մարտին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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High resolution mapping of Twi ...... and evolutionary conservation.

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High resolution mapping of Twi ...... and evolutionary conservation.

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High resolution mapping of Twi ...... and evolutionary conservation.

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High resolution mapping of Twi ...... and evolutionary conservation.

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High resolution mapping of Twi ...... and evolutionary conservation.

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High resolution mapping of Twi ...... and evolutionary conservation.

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High resolution mapping of Twi ...... and evolutionary conservation.

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High resolution mapping of Twi ...... and evolutionary conservation.

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High resolution mapping of Twi ...... and evolutionary conservation.

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High resolution mapping of Twi ...... and evolutionary conservation.

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Angelike Stathopoulos

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Anil Ozdemir

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Barbara J Wold

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Kenneth McCue

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Leslie Dunipace

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Lucy Zeng

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Manoj Samanta

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Nobuo Ogawa

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Shirley Pepke

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P2860

Evolution acts on enhancer organization to fine-tune gradient threshold readouts

Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm

Interactions between heterologous helix-loop-helix proteins generate complexes that bind specifically to a common DNA sequence

Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome

Genome-wide analysis of clustered Dorsal binding sites identifies putative target genes in the Drosophila embryo

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.

Helix-loop-helix proteins: regulators of transcription in eucaryotic organisms

Regulation of even-skipped stripe 2 in the Drosophila embryo

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

Functional cis-regulatory genomics for systems biology

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10.1101/GR.104018.109

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4

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21

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Katherine I Fisher-Aylor

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50304458

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