ChIP-nexus enables improved detection of in vivo transcription factor binding footprints.
about
Uncovering correlated variability in epigenomic datasets using the Karhunen-Loeve transformNext-Generation Sequencing Approaches in Cancer: Where Have They Brought Us and Where Will They Take Us?Spotting the enemy within: Targeted silencing of foreign DNA in mammalian genomes by the Krüppel-associated box zinc finger protein familyPredicting Ancestral Segmentation Phenotypes from Drosophila to Anopheles Using In Silico EvolutionCounteracting H3K4 methylation modulators Set1 and Jhd2 co-regulate chromatin dynamics and gene transcription.Protein-DNA binding in high-resolutionPAtCh-Cap: input strategy for improving analysis of ChIP-exo data sets and beyondCTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription.ChIPmentation: fast, robust, low-input ChIP-seq for histones and transcription factors.The orientation of transcription factor binding site motifs in gene promoter regions: does it matter?Genome-wide profiling of RNA polymerase transcription at nucleotide resolution in human cells with native elongating transcript sequencing.The Role of Genome Accessibility in Transcription Factor Binding in Bacteria.Preparation of Low-Input and Ligation-Free ChIP-seq Libraries Using Template-Switching Technology.Q-nexus: a comprehensive and efficient analysis pipeline designed for ChIP-nexus.Zelda overcomes the high intrinsic nucleosome barrier at enhancers during Drosophila zygotic genome activation.ChEC-seq kinetics discriminates transcription factor binding sites by DNA sequence and shape in vivo.RNA polymerase II pausing as a context-dependent reader of the genome.HIV Tat controls RNA Polymerase II and the epigenetic landscape to transcriptionally reprogram target immune cellsComprehensive RNA Polymerase II Interactomes Reveal Distinct and Varied Roles for Each Phospho-CTD Residue.Genome-wide identification of Drosophila dorso-ventral enhancers by differential histone acetylation analysis.Drosophila poised enhancers are generated during tissue patterning with the help of repression.An efficient targeted nuclease strategy for high-resolution mapping of DNA binding sites.UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracyPeakXus: comprehensive transcription factor binding site discovery from ChIP-Nexus and ChIP-Exo experiments.Evolution of regulatory networks in Candida glabrata: learning to live with the human host.Recent advances in ChIP-seq analysis: from quality management to whole-genome annotation.Divergent transcription and epigenetic directionality of human promoters.Transcription factor-DNA binding: beyond binding site motifs.Pause & go: from the discovery of RNA polymerase pausing to its functional implications.Most brain disease-associated and eQTL haplotypes are not located within transcription factor DNase-seq footprints in brain.DNAshapeR: an R/Bioconductor package for DNA shape prediction and feature encoding.Analysis of Viral Epigenotypes Using Chromatin Immunoprecipitation.Transcriptional response to stress is pre-wired by promoter and enhancer architectureData exploration, quality control and statistical analysis of ChIP-exo/nexus experiments.In vitro chlorhexidine release from alginate based microbeads for periodontal therapy.The efficacy and further functional advantages of random-base molecular barcodes for absolute and digital quantification of nucleic acid molecules.Exposing the secrets of sex determination.THiCweed: fast, sensitive detection of sequence features by clustering big datasets.Educational inequality in cancer mortality: a record linkage study of over 35 million Italians.Insights from resolving protein-DNA interactions at near base-pair resolution.
P2860
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P2860
ChIP-nexus enables improved detection of in vivo transcription factor binding footprints.
description
2015 nî lūn-bûn
@nan
2015年の論文
@ja
2015年論文
@yue
2015年論文
@zh-hant
2015年論文
@zh-hk
2015年論文
@zh-mo
2015年論文
@zh-tw
2015年论文
@wuu
2015年论文
@zh
2015年论文
@zh-cn
name
ChIP-nexus enables improved detection of in vivo transcription factor binding footprints.
@ast
ChIP-nexus enables improved detection of in vivo transcription factor binding footprints.
@en
type
label
ChIP-nexus enables improved detection of in vivo transcription factor binding footprints.
@ast
ChIP-nexus enables improved detection of in vivo transcription factor binding footprints.
@en
prefLabel
ChIP-nexus enables improved detection of in vivo transcription factor binding footprints.
@ast
ChIP-nexus enables improved detection of in vivo transcription factor binding footprints.
@en
P2860
P356
P1433
P1476
ChIP-nexus enables improved detection of in vivo transcription factor binding footprints.
@en
P2093
Julia Zeitlinger
P2860
P2888
P304
P356
10.1038/NBT.3121
P577
2015-03-09T00:00:00Z