Explaining complex codon usage patterns with selection for translational efficiency, mutation bias, and genetic drift.
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What Drives Positive Selection in the Drosophila piRNA Machinery? The Genomic Autoimmunity HypothesisHow do bacteria tune translation efficiency?Analysis of amino acid and codon usage in Paramecium bursariaDietary nitrogen alters codon bias and genome composition in parasitic microorganismsEstimating Gene Expression and Codon-Specific Translational Efficiencies, Mutation Biases, and Selection Coefficients from Genomic Data AloneOn ribosome load, codon bias and protein abundance.Entrainment to periodic initiation and transition rates in a computational model for gene translationCBDB: the codon bias database.Determinants of translation elongation speed and ribosomal profiling biases in mouse embryonic stem cells.Effective population size does not predict codon usage bias in mammalsEstimating selection on synonymous codon usage from noisy experimental data.Translational signatures and mRNA levels are highly correlated in human stably expressed genes.Genome-wide analysis of selective constraints on high stability regions of mRNA reveals multiple compensatory mutations in Escherichia coli.scnRCA: a novel method to detect consistent patterns of translational selection in mutationally-biased genomesSpeed controls in translating secretory proteins in eukaryotes--an evolutionary perspective.Analysis of codon usage bias of envelope glycoprotein genes in nuclear polyhedrosis virus (NPV) and its relation to evolutionThe construction and expression of lysine-rich gene in the mammary gland of transgenic mice.Gene Architectures that Minimize Cost of Gene Expression.Weak 5'-mRNA secondary structures in short eukaryotic genes.Vaccinia and influenza A viruses select rather than adjust tRNAs to optimize translation.Non-optimal codon usage is a mechanism to achieve circadian clock conditionality.Rate-limiting steps in yeast protein translation.Modulated Expression of Specific tRNAs Drives Gene Expression and Cancer Progression.Predictive biophysical modeling and understanding of the dynamics of mRNA translation and its evolution.tRNA-mediated codon-biased translation in mycobacterial hypoxic persistence.Synonymous codons, ribosome speed, and eukaryotic gene expression regulation.Efficient translation initiation dictates codon usage at gene start.Improved Ribosome-Footprint and mRNA Measurements Provide Insights into Dynamics and Regulation of Yeast Translation.Reduced Protein Expression in a Virus Attenuated by Codon Deoptimization.Discrepancy among the synonymous codons with respect to their selection as optimal codon in bacteria.Predicting synonymous codon usage and optimizing the heterologous gene for expression in E. coli.Codon optimization underpins generalist parasitism in fungi.Why we don't want another "Synthesis".Comparative genome analysis of six malarial parasites using codon usage bias based tools.Evolutionary conservation of codon optimality reveals hidden signatures of cotranslational folding.Somatic mutation driven codon transition bias in human cancer.The Amount of Nitrogen Used for Photosynthesis Modulates Molecular Evolution in Plants.The Evolution of Molecular Compatibility between Bacteriophage ΦX174 and its Host.The analysis of genome composition and codon bias reveals distinctive patterns between avian and mammalian circoviruses which suggest a potential recombinant origin for Porcine circovirus 3.corseq: fast and efficient identification of favoured codons from next generation sequencing reads.
P2860
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P2860
Explaining complex codon usage patterns with selection for translational efficiency, mutation bias, and genetic drift.
description
2011 nî lūn-bûn
@nan
2011 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Explaining complex codon usage ...... ation bias, and genetic drift.
@ast
Explaining complex codon usage ...... ation bias, and genetic drift.
@en
type
label
Explaining complex codon usage ...... ation bias, and genetic drift.
@ast
Explaining complex codon usage ...... ation bias, and genetic drift.
@en
prefLabel
Explaining complex codon usage ...... ation bias, and genetic drift.
@ast
Explaining complex codon usage ...... ation bias, and genetic drift.
@en
P2860
P356
P1476
Explaining complex codon usage ...... tation bias, and genetic drift
@en
P2093
Michael A Gilchrist
P2860
P304
10231-10236
P356
10.1073/PNAS.1016719108
P407
P50
P577
2011-06-06T00:00:00Z