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Systems-level dynamic analyses of fate change in murine embryonic stem cells

Systems-level dynamic analyses of fate change in murine embryonic stem cells

http://www.wikidata.org/entity/Q35420044

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SyStemCell: a database populated with multiple levels of experimental data from stem cell differentiation research Identification of aberrant pathways and network activities from high-throughput data The extended pluripotency protein interactome and its links to reprogramming The hypothalamic-neurohypophyseal system: from genome to physiology Systems-based technologies in profiling the stem cell molecular framework for cardioregenerative medicine NetExplore: a web server for modeling small network motifs.Gene networks of fully connected triads with complete auto-activation enable multistability and stepwise stochastic transitions Dynamic proteomics of human protein level and localization across the cell cycle Training signaling pathway maps to biochemical data with constrained fuzzy logic: quantitative analysis of liver cell responses to inflammatory stimuli The THO complex regulates pluripotency gene mRNA export and controls embryonic stem cell self-renewal and somatic cell reprogramming Genome-wide predictors of NF-κB recruitment and transcriptional activity Arena3D: visualizing time-driven phenotypic differences in biological systems.Functional evaluation of ES cell-derived endodermal populations reveals differences between Nodal and Activin A-guided differentiation.DREM 2.0: Improved reconstruction of dynamic regulatory networks from time-series expression data Gene pleiotropy constrains gene expression changes in fish adapted to different thermal conditions.MINIYO and transcriptional elongation: lifting the roadblock to differentiation.A homozygous mutant embryonic stem cell bank applicable for phenotype-driven genetic screening.Lists2Networks: integrated analysis of gene/protein lists.How to understand the cell by breaking it: network analysis of gene perturbation screens Cardiogenic induction of pluripotent stem cells streamlined through a conserved SDF-1/VEGF/BMP2 integrated network Knockdown of stem cell regulator Oct4A in ovarian cancer reveals cellular reprogramming associated with key regulators of cytoskeleton-extracellular matrix remodelling A comprehensive molecular interaction map for rheumatoid arthritis.Network systems biology for drug discovery.Fine-tuning of iPSC derivation by an inducible reprogramming system at the protein level.ExprEssence--revealing the essence of differential experimental data in the context of an interaction/regulation net-work Mapping dynamic histone acetylation patterns to gene expression in nanog-depleted murine embryonic stem cells.LINCS Canvas Browser: interactive web app to query, browse and interrogate LINCS L1000 gene expression signatures.Dynamic proteomic profiling of a unicellular cyanobacterium Cyanothece ATCC51142 across light-dark diurnal cycles.Toward a complete in silico, multi-layered embryonic stem cell regulatory network.Pluripotency factors in embryonic stem cells regulate differentiation into germ layers.The Lgr5 intestinal stem cell signature: robust expression of proposed quiescent '+4' cell markers Identification of nuclear protein targets for six leukemogenic tyrosine kinases governed by post-translational regulation.Direct transcriptional reprogramming of adult cells to embryonic nephron progenitors.MultiNotch MS3 enables accurate, sensitive, and multiplexed detection of differential expression across cancer cell line proteomes.Pluripotency and cellular reprogramming: facts, hypotheses, unresolved issues.High-resolution mapping of h1 linker histone variants in embryonic stem cells Distinct translational control in CD4+ T cell subsets.Small RNAs in early mammalian development: from gametes to gastrulation.Distinct allelic patterns of nanog expression impart embryonic stem cell population heterogeneity.Evaluating multiplexed quantitative phosphopeptide analysis on a hybrid quadrupole mass filter/linear ion trap/orbitrap mass spectrometer.

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P2860

Systems-level dynamic analyses of fate change in murine embryonic stem cells

http://www.wikidata.org/entity/Q35420044

description

2009 nî lūn-bûn

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2009 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

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2009 թվականի նոյեմբերին հրատարակված գիտական հոդված

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2009年の論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年論文

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2009年论文

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name

Systems-level dynamic analyses of fate change in murine embryonic stem cells

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Systems-level dynamic analyses of fate change in murine embryonic stem cells

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Systems-level dynamic analyses of fate change in murine embryonic stem cells

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Systems-level dynamic analyses of fate change in murine embryonic stem cells

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Systems-level dynamic analyses of fate change in murine embryonic stem cells

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Systems-level dynamic analyses of fate change in murine embryonic stem cells

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Systems-level dynamic analyses of fate change in murine embryonic stem cells

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Alexander Lachmann

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Ihor R Lemischka

http://www.w3.org/2001/XMLSchema#string

Laurie A Boyer

http://www.w3.org/2001/XMLSchema#string

Rong Lu

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Roye Rozov

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P2860

Getting started in probabilistic graphical models

Core transcriptional regulatory circuitry in human embryonic stem cells

Genome-scale DNA methylation maps of pluripotent and differentiated cells

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

Regulated fluctuations in nanog expression mediate cell fate decisions in embryonic stem cells

Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

Generation of germline-competent induced pluripotent stem cells

The homeoprotein Nanog is required for maintenance of pluripotency in mouse epiblast and ES cells

Functional expression cloning of Nanog, a pluripotency sustaining factor in embryonic stem cells

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358-362

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scholarly article

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10.1038/NATURE08575

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7271

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462

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Edoardo M Airoldi

Florian Markowetz

Jeffrey T. Leek

Richard D. Unwin

Anthony D Whetton

Ben D MacArthur

Olga Troyanskaya

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2009-11-01T00:00:00Z

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38099946

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1036433014

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19924215

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3199216

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