Unwrapping of nucleosomal DNA ends: a multiscale molecular dynamics study
about
Close encounters with DNATwo arginine residues suppress the flexibility of nucleosomal DNA in the canonical nucleosome coreDistinct Roles of Histone H3 and H2A Tails in Nucleosome Stability.An advanced coarse-grained nucleosome core particle model for computer simulations of nucleosome-nucleosome interactions under varying ionic conditionsSolution scattering and FRET studies on nucleosomes reveal DNA unwrapping effects of H3 and H4 tail removalSpeed of conformational change: comparing explicit and implicit solvent molecular dynamics simulationsThe role of histone tails in the nucleosome: a computational study.RedMDStream: Parameterization and Simulation Toolbox for Coarse-Grained Molecular Dynamics ModelsPartial Unwrapping and Histone Tail Dynamics in Nucleosome Revealed by Coarse-Grained Molecular SimulationsThe chromatin fiber: multiscale problems and approaches.H3 Histone Tail Conformation within the Nucleosome and the Impact of K14 Acetylation Studied Using Enhanced Sampling Simulation.Complete dissection of transcription elongation reveals slow translocation of RNA polymerase II in a linear ratchet mechanismClipping of flexible tails of histones H3 and H4 affects the structure and dynamics of the nucleosome.Linking Chromatin Fibers to Gene Folding by Hierarchical Looping.Unwinding and rewinding the nucleosome inner turn: force dependence of the kinetic rate constants.Structure-driven homology pairing of chromatin fibers: the role of electrostatics and protein-induced bridging.Nucleosomal elements that control the topography of the barrier to transcription.The effect of DNA CpG methylation on the dynamic conformation of a nucleosome.Molecular dynamics simulations demonstrate the regulation of DNA-DNA attraction by H4 histone tail acetylations and mutations.Asymmetric breathing motions of nucleosomal DNA and the role of histone tails.Constitutive centromere-associated network contacts confer differential stability on CENP-A nucleosomes in vitro and in the cell.Free energy profiles for unwrapping the outer superhelical turn of nucleosomal DNA.Interactions of HP1 Bound to H3K9me3 Dinucleosome by Molecular Simulations and Biochemical Assays.Open-Boundary Molecular Dynamics of a DNA Molecule in a Hybrid Explicit/Implicit Salt Solution.Major Determinants of Nucleosome Positioning.Mechanical evolution of DNA double-strand breaks in the nucleosome.Jörg Langowski: his scientific legacy and the future it promises
P2860
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P2860
Unwrapping of nucleosomal DNA ends: a multiscale molecular dynamics study
description
2012 nî lūn-bûn
@nan
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
2012年论文
@zh
2012年论文
@zh-cn
name
Unwrapping of nucleosomal DNA ends: a multiscale molecular dynamics study
@ast
Unwrapping of nucleosomal DNA ends: a multiscale molecular dynamics study
@en
type
label
Unwrapping of nucleosomal DNA ends: a multiscale molecular dynamics study
@ast
Unwrapping of nucleosomal DNA ends: a multiscale molecular dynamics study
@en
prefLabel
Unwrapping of nucleosomal DNA ends: a multiscale molecular dynamics study
@ast
Unwrapping of nucleosomal DNA ends: a multiscale molecular dynamics study
@en
P2093
P2860
P1433
P1476
Unwrapping of nucleosomal DNA ends: a multiscale molecular dynamics study
@en
P2093
Jeremy C Smith
Jörg Langowski
Karine Voltz
Nicolas Calimet
P2860
P304
P356
10.1016/J.BPJ.2011.11.4028
P407
P577
2012-02-21T00:00:00Z