Prokaryote phylogeny without sequence alignment: from avoidance signature to composition distance.
about
A fungal phylogeny based on 82 complete genomes using the composition vector methodCVTree update: a newly designed phylogenetic study platform using composition vectors and whole genomesPhylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria.Understanding the undelaying mechanism of HA-subtyping in the level of physic-chemical characteristics of proteinIs multiple-sequence alignment required for accurate inference of phylogeny?Separate base usages of genes located on the leading and lagging strands in Chlamydia muridarum revealed by the Z curve method.An improved string composition method for sequence comparison.Pattern-based phylogenetic distance estimation and tree reconstruction.MS4--Multi-Scale Selector of Sequence Signatures: an alignment-free method for classification of biological sequencesIntegrating overlapping structures and background information of words significantly improves biological sequence comparison.Alignment-free genetic sequence comparisons: a review of recent approaches by word analysis.A dictionary based informational genome analysis.Shigella strains are not clones of Escherichia coli but sister species in the genus EscherichiaPhylogeny and Taxonomy of Archaea: A Comparison of the Whole-Genome-Based CVTree Approach with 16S rRNA Sequence Analysis.CVTree: a phylogenetic tree reconstruction tool based on whole genomes.Phylogenetic tree construction using trinucleotide usage profile (TUP).CVTree3 Web Server for Whole-genome-based and Alignment-free Prokaryotic Phylogeny and Taxonomy.Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers.Fast algorithms for computing sequence distances by exhaustive substring compositionJackknife and bootstrap tests of the composition vector trees.SeeDNA: a visualization tool for K-string content of long DNA sequences and their randomized counterparts.Superstatistical model of bacterial DNA architecture.Phylogenetic and biological significance of evolutionary elements from metazoan mitochondrial genomes.Weighted relative entropy for alignment-free sequence comparison based on Markov model.Using Markov model to improve word normalization algorithm for biological sequence comparison.
P2860
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P2860
Prokaryote phylogeny without sequence alignment: from avoidance signature to composition distance.
description
2004 nî lūn-bûn
@nan
2004年の論文
@ja
2004年論文
@yue
2004年論文
@zh-hant
2004年論文
@zh-hk
2004年論文
@zh-mo
2004年論文
@zh-tw
2004年论文
@wuu
2004年论文
@zh
2004年论文
@zh-cn
name
Prokaryote phylogeny without s ...... ature to composition distance.
@ast
Prokaryote phylogeny without s ...... ature to composition distance.
@en
type
label
Prokaryote phylogeny without s ...... ature to composition distance.
@ast
Prokaryote phylogeny without s ...... ature to composition distance.
@en
prefLabel
Prokaryote phylogeny without s ...... ature to composition distance.
@ast
Prokaryote phylogeny without s ...... ature to composition distance.
@en
P2860
P1476
Prokaryote phylogeny without s ...... ature to composition distance.
@en
P2093
P2860
P356
10.1142/S0219720004000442
P577
2004-03-01T00:00:00Z