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Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa

Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa

http://www.wikidata.org/entity/Q35847274

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Molecular tools in understanding the evolution of Vibrio cholerae Clinical isolates of Vibrio cholerae O1 El Tor Ogawa of 2009 from Kolkata, India: preponderance of SXT element and presence of Haitian ctxB variant The population structure of Vibrio cholerae from the Chandigarh Region of Northern India Navigating Microbiological Food Safety in the Era of Whole-Genome Sequencing Whole-genome sequencing in outbreak analysis Genomic epidemiology of Vibrio cholerae O1 associated with floods, Pakistan, 2010.Genomic science in understanding cholera outbreaks and evolution of Vibrio cholerae as a human pathogen.Comparative genomic characterization of a Thailand-Myanmar isolate, MS6, of Vibrio cholerae O1 El Tor, which is phylogenetically related to a "US Gulf Coast" clone.Cholera outbreaks (2012) in three districts of Nepal reveal clonal transmission of multi-drug resistant Vibrio cholerae O1 Acquisition and evolution of SXT-R391 integrative conjugative elements in the seventh-pandemic Vibrio cholerae lineage.Worldwide occurrence of integrative conjugative element encoding multidrug resistance determinants in epidemic Vibrio cholerae O1.Genome Sequence of Vibrio cholerae Strain O1 Ogawa El Tor, Isolated in Mexico, 2013.The Vibrio cholerae Cpx envelope stress response senses and mediates adaptation to low iron.Genomic epidemiology of the Haitian cholera outbreak: a single introduction followed by rapid, extensive, and continued spread characterized the onset of the epidemic.Transfer activation of SXT/R391 integrative and conjugative elements: unraveling the SetCD regulon.Phenotypic Analysis Reveals that the 2010 Haiti Cholera Epidemic Is Linked to a Hypervirulent Strain Comparative genome analysis of VSP-II and SNPs reveals heterogenic variation in contemporary strains of Vibrio cholerae O1 isolated from cholera patients in Kolkata, India.Analysis of Vibrio cholerae genome sequences reveals unique rtxA variants in environmental strains and an rtxA-null mutation in recent altered El Tor isolates.Food Safety in the Age of Next Generation Sequencing, Bioinformatics, and Open Data Access.Clostridium botulinum Group II Isolate Phylogenomic Profiling Using Whole-Genome Sequence Data.Sequence polymorphisms of rfbT among the Vibrio cholerae O1 strains in the Ogawa and Inaba serotype shifts.The 2010 cholera outbreak in Haiti: how science solved a controversy Draft Genome Sequencing of Vibrio cholerae O1 El Tor Isolates Collected in the Russian Federation from Imported Cholera Cases.A hybrid approach for the automated finishing of bacterial genomes Comparative genomics of 274 Vibrio cholerae genomes reveals mobile functions structuring three niche dimensions Whole-genome mapping: a new paradigm in strain-typing technology.Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti.High depth, whole-genome sequencing of cholera isolates from Haiti and the Dominican Republic.Genetic traits of Vibrio cholerae O1 Haitian isolates that are absent in contemporary strains from Kolkata, India Comparative Genomics Reveal That Host-Innate Immune Responses Influence the Clinical Prevalence of Legionella pneumophila Serogroups.Concordance and discordance of sequence survey methods for molecular epidemiology Environmental surveillance for toxigenic Vibrio cholerae in surface waters of Haiti.The Cpx system regulates virulence gene expression in Vibrio cholerae.Drug-resistance mechanisms in Vibrio cholerae O1 outbreak strain, Haiti, 2010.Characterization of toxigenic Vibrio cholerae from Haiti, 2010-2011.The Lake Chad Basin, an Isolated and Persistent Reservoir of Vibrio cholerae O1: A Genomic Insight into the Outbreak in Cameroon, 2010.Genomic diversity of 2010 Haitian cholera outbreak strains.Genetic Studies of Vibrio cholerae in South West Cameroon-A Phylogenetic Analysis of Isolates from the 2010-2011 Epidemic Retrospective Analysis of Serotype Switching of Vibrio cholerae O1 in a Cholera Endemic Region Shows It Is a Non-random Process.From cholera to corals: Viruses as drivers of virulence in a major coral bacterial pathogen.

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Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa

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Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa

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Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa

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Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa

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Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa

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Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa

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Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa

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Aleisha R Reimer

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Anthony M Smith

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P2860

DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Use of automated sequencing of polymerase chain reaction-generated amplicons to identify three types of cholera toxin subunit B in Vibrio cholerae O1 strains

Identifying bacterial genes and endosymbiont DNA with Glimmer

The origin of the Haitian cholera outbreak strain

A recalibrated molecular clock and independent origins for the cholera pandemic clones

Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative

Whole-genome sequencing and social-network analysis of a tuberculosis outbreak

progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

Rapid pneumococcal evolution in response to clinical interventions

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10.3201/EID1711.110794

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Vibrio cholerae

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3310578

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