Searching for and predicting the activity of sites for DNA binding proteins: compilation and analysis of the binding sites for Escherichia coli integration host factor (IHF)
about
Building a bacterial orisome: emergence of new regulatory features for replication origin unwindingTn10 insertion specificity is strongly dependent upon sequences immediately adjacent to the target-site consensus sequenceThe replication of an IncL/M plasmid is subject to antisense controlComputational technique for improvement of the position-weight matrices for the DNA/protein binding sitesProkaryotic genome regulation: a revolutionary paradigmShaping the Borrelia burgdorferi genome: crystal structure and binding properties of the DNA-bending protein HbbA dual binding site for integration host factor and the response regulator CtrA inside the Caulobacter crescentus replication origin.Functional analysis of the integration host factor site of the σ(54) Pu promoter of Pseudomonas putida by in vivo UV imprinting.Suppression of FNR-dependent transcription activation at the Escherichia coli nir promoter by Fis, IHF and H-NS: modulation of transcription initiation by a complex nucleo-protein assembly.Physical organization of DNA by multiple non-specific DNA-binding modes of integration host factor (IHF).In vivo UV laser footprinting of the Pseudomonas putidasigma 54Pu promoter reveals that integration host factor couples transcriptional activity to growth phase.Characterization of in vitro DNA binding sites of the EUO protein of Chlamydia psittaci.In vitro selection of integration host factor binding sitesComplete DNA sequence and detailed analysis of the Yersinia pestis KIM5 plasmid encoding murine toxin and capsular antigenRole of global regulators and nucleotide metabolism in antibiotic tolerance in Escherichia coli.Diversity and transcription of proteases involved in the maturation of hydrogenases in Nostoc punctiforme ATCC 29133 and Nostoc sp. strain PCC 7120.An AT-rich tract containing an integration host factor-binding domain and two UP-like elements enhances transcription from the pilEp1 promoter of Neisseria gonorrhoeae.Identification and characterization of the fis operon in enteric bacteriaHU, the major histone-like protein of E. coli, modulates the binding of IHF to oriC.Sequence of the genome of the temperate, serotype-converting, Pseudomonas aeruginosa bacteriophage D3Sequence of the genome of Salmonella bacteriophage P22Activation from a distance: roles of Lrp and integration host factor in transcriptional activation of gltBDF.Strong minor groove base conservation in sequence logos implies DNA distortion or base flipping during replication and transcription initiation.The P1 phage replication protein RepA contacts an otherwise inaccessible thymine N3 proton by DNA distortion or base flipping.Specific interaction of IHF with RIBs, a class of bacterial repetitive DNA elements located at the 3' end of transcription units.Developmental precise excision of Oxytricha trifallax telomere-bearing elements and formation of circles closed by a copy of the flanking target duplication.Repression of aerobic leukotoxin transcription by integration host factor in Aggregatibacter actinomycetemcomitansXis protein binding to the left arm stimulates excision of conjugative transposon Tn916The phi29 transcriptional regulator contacts the nucleoid protein p6 to organize a repression complexOptimizing the GATA-3 position weight matrix to improve the identification of novel binding sites.Genomic analysis of the regulatory elements and links with intrinsic DNA structural properties in the shrunken genome of Buchnera.Subdivision of large introns in Drosophila by recursive splicing at nonexonic elementsMolecular dissection of Mycobacterium tuberculosis integration host factor reveals novel insights into the mode of DNA binding and nucleoid compactionSequence walkers: a graphical method to display how binding proteins interact with DNA or RNA sequences.Consensus inverted terminal repeat sequence of Paramecium IESs: resemblance to termini of Tc1-related and Euplotes Tec transposons.Analysis of the proteins and cis-acting elements regulating the stress-induced phage shock protein operon.In vivo interaction of the Escherichia coli integration host factor with its specific binding sites.Refining the binding of the Escherichia coli flagellar master regulator, FlhD4C2, on a base-specific levelThe Bacteroides thetaiotaomicron protein Bacteroides host factor A participates in integration of the integrative conjugative element CTnDOT into the chromosome.ompH gene expression is regulated by multiple environmental cues in addition to high pressure in the deep-sea bacterium Photobacterium species strain SS9
P2860
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P2860
Searching for and predicting the activity of sites for DNA binding proteins: compilation and analysis of the binding sites for Escherichia coli integration host factor (IHF)
description
1990 nî lūn-bûn
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1990年の論文
@ja
1990年学术文章
@wuu
1990年学术文章
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1990年学术文章
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1990年学术文章
@zh-hans
1990年学术文章
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1990年学术文章
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1990年學術文章
@zh-hant
name
Searching for and predicting t ...... integration host factor (IHF)
@ast
Searching for and predicting t ...... integration host factor (IHF)
@en
type
label
Searching for and predicting t ...... integration host factor (IHF)
@ast
Searching for and predicting t ...... integration host factor (IHF)
@en
prefLabel
Searching for and predicting t ...... integration host factor (IHF)
@ast
Searching for and predicting t ...... integration host factor (IHF)
@en
P2093
P2860
P356
P1476
Searching for and predicting t ...... integration host factor (IHF)
@en
P2093
J A Goodrich
M L Schwartz
W R McClure
P2860
P304
P356
10.1093/NAR/18.17.4993
P407
P577
1990-09-01T00:00:00Z