Protein misinteraction avoidance causes highly expressed proteins to evolve slowly - Wikidata - wikimedia - TriplyDB

Protein misinteraction avoidance causes highly expressed proteins to evolve slowly

Protein misinteraction avoidance causes highly expressed proteins to evolve slowly

http://www.wikidata.org/entity/Q35887320

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Protein stickiness, rather than number of functional protein-protein interactions, predicts expression noise and plasticity in yeast Causes of evolutionary rate variation among protein sites Comparing protein folding in vitro and in vivo: foldability meets the fitness challenge Loss of quaternary structure is associated with rapid sequence divergence in the OSBS family Selection on Network Dynamics Drives Differential Rates of Protein Domain Evolution Determinants of the rate of protein sequence evolution Experimental evolution of protein-protein interaction networks Evaluating the fitness cost of protein expression in Saccharomyces cerevisiae.Selection on protein structure, interaction, and sequence.Biophysical Models of Protein Evolution: Understanding the Patterns of Evolutionary Sequence Divergence.Independent effects of protein core size and expression on residue-level structure-evolution relationships.Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes.Protein biophysics explains why highly abundant proteins evolve slowly The ortholog conjecture is untestable by the current gene ontology but is supported by RNA sequencing data.Protein-protein binding selectivity and network topology constrain global and local properties of interface binding networks.Codon-by-codon modulation of translational speed and accuracy via mRNA folding.Evidence for widespread positive and negative selection in coding and conserved noncoding regions of Capsella grandiflora.Biophysics of protein evolution and evolutionary protein biophysics Purifying selection on splice-related motifs, not expression level nor RNA folding, explains nearly all constraint on human lincRNAs.Evolutionary capacitance and control of protein stability in protein-protein interaction networks.Translational signatures and mRNA levels are highly correlated in human stably expressed genes.Testing whether metazoan tyrosine loss was driven by selection against promiscuous phosphorylation.Transcriptional abundance is not the single force driving the evolution of bacterial proteins Protein folding and binding can emerge as evolutionary spandrels through structural coupling.Universal distribution of mutational effects on protein stability, uncoupling of protein robustness from sequence evolution and distinct evolutionary modes of prokaryotic and eukaryotic proteins.Characterizing selective pressures on the pathway for de novo biosynthesis of pyrimidines in yeast Polymorphism Analysis Reveals Reduced Negative Selection and Elevated Rate of Insertions and Deletions in Intrinsically Disordered Protein Regions.High expression hampers horizontal gene transfer.Genetic Variation of Goat Interferon Regulatory Factor 3 Gene and Its Implication in Goat Evolution.Adaptation of A-to-I RNA editing in Drosophila.Nascent RNA folding mitigates transcription-associated mutagenesis The Roles of Compensatory Evolution and Constraint in Aminoacyl tRNA Synthetase Evolution.Expression Differentiation Is Constrained to Low-Expression Proteins over Ecological Timescales.Genomic evidence for elevated mutation rates in highly expressed genes Cellular crowding imposes global constraints on the chemistry and evolution of proteomes.Differential requirements for mRNA folding partially explain why highly expressed proteins evolve slowly.Flagellated algae protein evolution suggests the prevalence of lineage-specific rules governing evolutionary rates of eukaryotic proteins Abundance and Temperature Dependency of Protein-Protein Interaction Revealed by Interface Structure Analysis and Stability Evolution.Population size dependence of fitness effect distribution and substitution rate probed by biophysical model of protein thermostability.Complex Patterns of Association between Pleiotropy and Transcription Factor Evolution.

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P2860

Protein misinteraction avoidance causes highly expressed proteins to evolve slowly

http://www.wikidata.org/entity/Q35887320

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2012 nî lūn-bûn

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2012年论文

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2012年论文

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2012年论文

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name

Protein misinteraction avoidance causes highly expressed proteins to evolve slowly

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Protein misinteraction avoidance causes highly expressed proteins to evolve slowly

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type

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Protein misinteraction avoidance causes highly expressed proteins to evolve slowly

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Protein misinteraction avoidance causes highly expressed proteins to evolve slowly

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prefLabel

Protein misinteraction avoidance causes highly expressed proteins to evolve slowly

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Protein misinteraction avoidance causes highly expressed proteins to evolve slowly

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PNAS.1117408109

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Proceedings of the National Academy of Sciences of the United States of America

P1476

Protein misinteraction avoidance causes highly expressed proteins to evolve slowly

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P2093

Ben-Yang Liao

http://www.w3.org/2001/XMLSchema#string

Jian-Rong Yang

http://www.w3.org/2001/XMLSchema#string

Jianzhi Zhang

http://www.w3.org/2001/XMLSchema#string

Shi-Mei Zhuang

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P2860

Gene ontology: tool for the unification of biology

Functional organization of the yeast proteome by systematic analysis of protein complexes

Modulation of the vitamin D3 response by cancer-associated mutant p53

The Protein Data Bank

Non-adaptive origins of interactome complexity

No simple dependence between protein evolution rate and the number of protein-protein interactions: only the most prolific interactors tend to evolve slowly

I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure.

A simple method for displaying the hydropathic character of a protein

Global analysis of protein localization in budding yeast.

Clustal W and Clustal X version 2.0

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10.1073/PNAS.1117408109

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2012-03-13T00:00:00Z

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