Single-stranded DNA scanning and deamination by APOBEC3G cytidine deaminase at single molecule resolution. - Wikidata - wikimedia - TriplyDB

Single-stranded DNA scanning and deamination by APOBEC3G cytidine deaminase at single molecule resolution.

Single-stranded DNA scanning and deamination by APOBEC3G cytidine deaminase at single molecule resolution.

http://www.wikidata.org/entity/Q35939875

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Multiple APOBEC3 restriction factors for HIV-1 and one Vif to rule them all Suppression of APOBEC3-mediated restriction of HIV-1 by Vif Differential interaction kinetics of a bipolar structure-specific endonuclease with DNA flaps revealed by single-molecule imaging Activation-induced deoxycytidine deaminase (AID) co-transcriptional scanning at single-molecule resolution.NMR structure of human restriction factor APOBEC3A reveals substrate binding and enzyme specificity Interaction of APOBEC3A with DNA assessed by atomic force microscopy Different mutagenic potential of HIV-1 restriction factors APOBEC3G and APOBEC3F is determined by distinct single-stranded DNA scanning mechanisms Single-Molecule Pull-Down FRET to Dissect the Mechanisms of Biomolecular Machines Nanoscale structure and dynamics of ABOBEC3G complexes with single-stranded DNA.AID and Apobec3G haphazard deamination and mutational diversity Cytidine deaminase efficiency of the lentiviral viral restriction factor APOBEC3C correlates with dimerization.Host restriction of murine gammaherpesvirus 68 replication by human APOBEC3 cytidine deaminases but not murine APOBEC3.APOBEC3G inhibits HIV-1 RNA elongation by inactivating the viral trans-activation response element.Diffusion of human replication protein A along single-stranded DNA.Catalytic analysis of APOBEC3G involving real-time NMR spectroscopy reveals nucleic acid determinants for deamination.APOBEC3G Interacts with ssDNA by Two Modes: AFM Studies.Biochemical analysis of hypermutation by the deoxycytidine deaminase APOBEC3A.Natural Polymorphisms and Oligomerization of Human APOBEC3H Contribute to Single-stranded DNA Scanning Ability.Random-walk enzymes Inhibition of APOBEC3G activity impedes double-stranded DNA repair Suppression of HIV-1 infection by APOBEC3 proteins in primary human CD4(+) T cells is associated with inhibition of processive reverse transcription as well as excessive cytidine deamination.HIV-1 viral infectivity factor (Vif) alters processive single-stranded DNA scanning of the retroviral restriction factor APOBEC3G DNA translocation by human uracil DNA glycosylase: role of DNA phosphate charge.DNA translocation by human uracil DNA glycosylase: the case of single-stranded DNA and clustered uracils.APOBEC3G cytosine deamination hotspots are defined by both sequence context and single-stranded DNA secondary structure.Nucleic acid determinants for selective deamination of DNA over RNA by activation-induced deaminase.An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancers.A biochemical analysis linking APOBEC3A to disparate HIV-1 restriction and skin cancer A mathematical model for scanning and catalysis on single-stranded DNA, illustrated with activation-induced deoxycytidine deaminase APOBEC3 proteins can copackage and comutate HIV-1 genomes.Mechanism of Enhanced HIV Restriction by Virion Coencapsidated Cytidine Deaminases APOBEC3F and APOBEC3G.Oligomerization transforms human APOBEC3G from an efficient enzyme to a slowly dissociating nucleic acid-binding protein.Dynamic unwrapping of nucleosomes by HsRAD51 that includes sliding and rotational motion of histone octamers.RNA binding to APOBEC deaminases; Not simply a substrate for C to U editing.The C-terminal cytidine deaminase domain of APOBEC3G itself undergoes intersegmental transfer for a target search, as revealed by real-time NMR monitoring.Dimerization regulates both deaminase-dependent and deaminase-independent HIV-1 restriction by APOBEC3G.Electrostatic properties of complexes along a DNA glycosylase damage search pathway Quantitative analysis of location- and sequence-dependent deamination by APOBEC3G using real-time NMR spectroscopy.Fork sensing and strand switching control antagonistic activities of RecQ helicases.Computational Model and Dynamics of Monomeric Full-Length APOBEC3G.

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Single-stranded DNA scanning and deamination by APOBEC3G cytidine deaminase at single molecule resolution.

http://www.wikidata.org/entity/Q35939875

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2012 nî lūn-bûn

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Single-stranded DNA scanning a ...... at single molecule resolution.

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Journal of Biological Chemistry

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Single-stranded DNA scanning a ...... at single molecule resolution

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David Rueda

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Gayan Senavirathne

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Malgorzata Jaszczur

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Myron F Goodman

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Paul A Auerbach

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Thomas G Upton

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P2860

The cytidine deaminase CEM15 induces hypermutation in newly synthesized HIV-1 DNA

How do site-specific DNA-binding proteins find their targets?

Structural model for deoxycytidine deamination mechanisms of the HIV-1 inactivation enzyme APOBEC3G

Crystal structure of the anti-viral APOBEC3G catalytic domain and functional implications

Broad antiretroviral defence by human APOBEC3G through lethal editing of nascent reverse transcripts

Virion-associated uracil DNA glycosylase-2 and apurinic/apyrimidinic endonuclease are involved in the degradation of APOBEC3G-edited nascent HIV-1 DNA

The retroviral hypermutation specificity of APOBEC3F and APOBEC3G is governed by the C-terminal DNA cytosine deaminase domain

Likely role of APOBEC3G-mediated G-to-A mutations in HIV-1 evolution and drug resistance

Single-strand specificity of APOBEC3G accounts for minus-strand deamination of the HIV genome

A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA.

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15826-15835

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3346118

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