Configuration-dependent diffusion can shift the kinetic transition state and barrier height of protein folding
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Connecting the kinetics and energy landscape of tRNA translocation on the ribosomeAn all-atom structure-based potential for proteins: bridging minimal models with all-atom empirical forcefields.Src kinase conformational activation: thermodynamics, pathways, and mechanisms.Measuring internal friction of an ultrafast-folding proteinQuantifying DNA melting transitions using single-molecule force spectroscopy.Data-driven approach to decomposing complex enzyme kinetics with surrogate models.Coordinate-dependent diffusion in protein folding.Is protein folding sub-diffusive?Fast protein folding kineticsThe origin of nonmonotonic complex behavior and the effects of nonnative interactions on the diffusive properties of protein foldingFree energy calculations reveal rotating-ratchet mechanism for DNA supercoil relaxation by topoisomerase IB and its inhibition.Connecting energy landscapes with experimental rates for aminoacyl-tRNA accommodation in the ribosome.Folding pathway of a multidomain protein depends on its topology of domain connectivity.Finite Element Estimation of Protein-Ligand Association Rates with Post-Encounter Effects: Applications to Calcium binding in Troponin C and SERCA.Protein folding studied by single-molecule FRET.Native contact density and nonnative hydrophobic effects in the folding of bacterial immunity proteins.Protein misfolding occurs by slow diffusion across multiple barriers in a rough energy landscape.Resolution of Two Sub-Populations of Conformers and Their Individual Dynamics by Time Resolved Ensemble Level FRET Measurements.Diffusion models of protein foldingQuantifying internal friction in unfolded and intrinsically disordered proteins with single-molecule spectroscopy.Localizing internal friction along the reaction coordinate of protein folding by combining ensemble and single-molecule fluorescence spectroscopyTransition paths, diffusive processes, and preequilibria of protein folding.Rate theories for biologistsBiomolecular dynamics: order-disorder transitions and energy landscapesInfrared and Fluorescence Assessment of Protein Dynamics: From Folding to Function.Assessment of local friction in protein folding dynamics using a helix cross-linker.Observation of complete pressure-jump protein refolding in molecular dynamics simulation and experiment.Exploring multi-dimensional coordinate-dependent diffusion dynamics on the energy landscape of protein conformation change.Analytical correlation functions for motion through diffusivity landscapes.Imprints of function on the folding landscape: functional role for an intermediate in a conserved eukaryotic binding protein.Quantifying Nonnative Interactions in the Protein-Folding Free-Energy Landscape.Quantifying multiscale noise sources in single-molecule time series.Influence of proline on the thermostability of the active site and membrane arrangement of transmembrane proteins.Confinement-dependent friction in peptide bundlesDirect measurement of sequence-dependent transition path times and conformational diffusion in DNA duplex formation.Subdiffusion of proteins and oligomers on membranes.The diffusion coefficient for PGK folding in eukaryotic cells.Extracting Kinetic and Stationary Distribution Information from Short MD Trajectories via a Collection of Surrogate Diffusion Models.A minimum-reaction-flux solution to master-equation models of protein folding.How the diffusivity profile reduces the arbitrariness of protein folding free energies.
P2860
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P2860
Configuration-dependent diffusion can shift the kinetic transition state and barrier height of protein folding
description
2007 nî lūn-bûn
@nan
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
2007年论文
@zh
2007年论文
@zh-cn
name
Configuration-dependent diffus ...... rier height of protein folding
@ast
Configuration-dependent diffus ...... rier height of protein folding
@en
type
label
Configuration-dependent diffus ...... rier height of protein folding
@ast
Configuration-dependent diffus ...... rier height of protein folding
@en
prefLabel
Configuration-dependent diffus ...... rier height of protein folding
@ast
Configuration-dependent diffus ...... rier height of protein folding
@en
P2093
P2860
P356
P1476
Configuration-dependent diffus ...... rier height of protein folding
@en
P2093
Jorge Chahine
Vitor B P Leite
P2860
P304
14646-14651
P356
10.1073/PNAS.0606506104
P407
P577
2007-09-05T00:00:00Z