A transcription factor affinity-based code for mammalian transcription initiation
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Adaptation of peroxisome proliferator-activated receptor alpha to hibernation in batsA paired-end sequencing strategy to map the complex landscape of transcription initiation.In Silico Promoter Recognition from deepCAGE Data.Identifying regulatory elements in eukaryotic genomes.Promoting developmental transcription.The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation.Turnover and lineage-specific broadening of the transcription start site in a testis-specific retrogene.Transcription initiation patterns indicate divergent strategies for gene regulation at the chromatin levelA quantitative model of transcriptional regulation reveals the influence of binding location on expressionBivalent-like chromatin markers are predictive for transcription start site distribution in humanNanoCAGE-XL and CapFilter: an approach to genome wide identification of high confidence transcription start sitesMultiple novel promoter-architectures revealed by decoding the hidden heterogeneity within the genome.Explicit DNase sequence bias modeling enables high-resolution transcription factor footprint detection.Human promoters are intrinsically directional.Determination and inference of eukaryotic transcription factor sequence specificity.Discriminative prediction of mammalian enhancers from DNA sequence.Genome-wide annotation of microRNA primary transcript structures reveals novel regulatory mechanismsTIPR: transcription initiation pattern recognition on a genome scaleFrom transcription start site to cell biology.Small Genetic Circuits and MicroRNAs: Big Players in Polymerase II Transcriptional Control in Plants.Identification of active miRNA promoters from nuclear run-on RNA sequencing.Understanding the combinatorial action of transcription factors and microRNA regulation from regions of open chromatin.Predicting cell-type-specific gene expression from regions of open chromatin.Illuminating transcription pathways using fluorescent reporter genes and yeast functional genomics.PROmiRNA: a new miRNA promoter recognition method uncovers the complex regulation of intronic miRNAs.microTSS: accurate microRNA transcription start site identification reveals a significant number of divergent pri-miRNAs.A unified model for yeast transcript definition.Tissue expression analysis, cloning and characterization of the 5'-regulatory region of the bovine FABP3 gene.Human genes with CpG island promoters have a distinct transcription-associated chromatin organization.Paired-end analysis of transcription start sites in Arabidopsis reveals plant-specific promoter signatures.Tissue expression analysis, cloning, and characterization of the 5'-regulatory region of the bovine fatty acid binding protein 4 gene.Determinants of promoter and enhancer transcription directionality in metazoansFACT Sets a Barrier for Cell Fate Reprogramming in Caenorhabditis elegans and Human Cells
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P2860
A transcription factor affinity-based code for mammalian transcription initiation
description
article científic
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article scientifique
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articolo scientifico
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artigo científico
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bilimsel makale
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scientific article published on 13 January 2009
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vedecký článok
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vetenskaplig artikel
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videnskabelig artikel
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vědecký článek
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name
A transcription factor affinity-based code for mammalian transcription initiation
@en
A transcription factor affinity-based code for mammalian transcription initiation.
@nl
type
label
A transcription factor affinity-based code for mammalian transcription initiation
@en
A transcription factor affinity-based code for mammalian transcription initiation.
@nl
prefLabel
A transcription factor affinity-based code for mammalian transcription initiation
@en
A transcription factor affinity-based code for mammalian transcription initiation.
@nl
P2093
P2860
P356
P1433
P1476
A transcription factor affinity-based code for mammalian transcription initiation
@en
P2093
Artemis G Hatzigeorgiou
Fernando Pereira
Molly Megraw
Shane T Jensen
P2860
P304
P356
10.1101/GR.085449.108
P50
P577
2009-01-13T00:00:00Z