Ecological patterns of nifH genes in four terrestrial climatic zones explored with targeted metagenomics using FrameBot, a new informatics tool.
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Network analysis reveals ecological links between N-fixing bacteria and wood-decaying fungiQuantitative and compositional responses of ammonia-oxidizing archaea and bacteria to long-term field fertilizationDenitrifying and diazotrophic community responses to artificial warming in permafrost and tallgrass prairie soils.High levels of heterogeneity in diazotroph diversity and activity within a putative hotspot for marine nitrogen fixationNutrient uplift in a cyclonic eddy increases diversity, primary productivity and iron demand of microbial communities relative to a western boundary current.Methane turnover and methanotrophic communities in arctic aquatic ecosystems of the Lena Delta, Northeast Siberia.Improve homology search sensitivity of PacBio data by correcting frameshifts.Nitrogen fertilization has a stronger effect on soil nitrogen-fixing bacterial communities than elevated atmospheric CO2.Hypoxia and Inactivity Related Physiological Changes (Constipation, Inflammation) Are Not Reflected at the Level of Gut Metabolites and Butyrate Producing Microbial Community: The PlanHab Study.Contrasting bacterial communities in two indigenous Chionochloa (Poaceae) grassland soils in New Zealand.Detecting nitrous oxide reductase (NosZ) genes in soil metagenomes: method development and implications for the nitrogen cycle.Differential distribution and abundance of diazotrophic bacterial communities across different soil niches using a gene-targeted clone library approach.Diet is a major factor governing the fecal butyrate-producing community structure across Mammalia, Aves and Reptilia.Evaluation of the Ion Torrent Personal Genome Machine for Gene-Targeted Studies Using Amplicons of the Nitrogenase Gene nifHStrong shift in the diazotrophic endophytic bacterial community inhabiting rice (Oryza sativa) plants after flooding.Comparisons of diazotrophic communities in native and agricultural desert ecosystems reveal plants as important drivers in diversityXander: employing a novel method for efficient gene-targeted metagenomic assembly.Biogeographic patterns of soil diazotrophic communities across six forests in the North America.Metagenomic Analysis of Chicken Gut Microbiota for Improving Metabolism and Health of Chickens - A Review.Nitrogen Cycling Potential of a Grassland Litter Microbial Community.Diazotroph community structure in the deep oxygen minimum zone of the Costa Rica Dome.Conventional methanotrophs are responsible for atmospheric methane oxidation in paddy soils.Functional genes to assess nitrogen cycling and aromatic hydrocarbon degradation: primers and processing matter.FunGene: the functional gene pipeline and repositoryTitanium dioxide nanoparticles strongly impact soil microbial function by affecting archaeal nitrifiers.The Shifts of Diazotrophic Communities in Spring and Summer Associated with Coral Galaxea astreata, Pavona decussata, and Porites lutea.NifH-Harboring Bacterial Community Composition across an Alaskan Permafrost Thaw Gradient.Uncovering the trimethylamine-producing bacteria of the human gut microbiota.Diversity of Total Bacterial Communities and Chemoautotrophic Populations in Sulfur-Rich Sediments of Shallow-Water Hydrothermal Vents off Kueishan Island, Taiwan.Complex N acquisition by soil diazotrophs: how the ability to release exoenzymes affects N fixation by terrestrial free-living diazotrophsMetagenomic survey of methanesulfonic acid (MSA) catabolic genes in an Atlantic Ocean surface water sample and in a partial enrichment.Diversity and dynamics of algal Megaviridae members during a harmful brown tide caused by the pelagophyte, Aureococcus anophagefferens.TCDD influences reservoir of antibiotic resistance genes in murine gut microbiome.Hunting Down Frame Shifts: Ecological Analysis of Diverse Functional Gene Sequences.Seasonal total methane depletion in limestone caves.The Green Berry Consortia of the Sippewissett Salt Marsh: Millimeter-Sized Aggregates of Diazotrophic Unicellular CyanobacteriaAnalysis of nifH-RNA reveals phylotypes related to Geobacter and Cyanobacteria as important functional components of the N2 -fixing community depending on depth and agricultural use of soil.MegaGTA: a sensitive and accurate metagenomic gene-targeted assembler using iterative de Bruijn graphs.Colonic Butyrate-Producing Communities in Humans: an Overview Using Omics Data.Identification of Syntrophobacteraceae as major acetate-degrading sulfate reducing bacteria in Italian paddy soil.
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Ecological patterns of nifH genes in four terrestrial climatic zones explored with targeted metagenomics using FrameBot, a new informatics tool.
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
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scientific article published on 17 September 2013
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vedecký článok
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vetenskaplig artikel
@sv
videnskabelig artikel
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vědecký článek
@cs
name
Ecological patterns of nifH ge ...... meBot, a new informatics tool.
@en
Ecological patterns of nifH ge ...... meBot, a new informatics tool.
@nl
type
label
Ecological patterns of nifH ge ...... meBot, a new informatics tool.
@en
Ecological patterns of nifH ge ...... meBot, a new informatics tool.
@nl
prefLabel
Ecological patterns of nifH ge ...... meBot, a new informatics tool.
@en
Ecological patterns of nifH ge ...... meBot, a new informatics tool.
@nl
P2093
P2860
P356
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P1476
Ecological patterns of nifH ge ...... meBot, a new informatics tool.
@en
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James R Cole
John F Quensen
Jordan A Fish
Qiong Wang
Tae Kwon Lee
P2860
P304
P356
10.1128/MBIO.00592-13
P50
P577
2013-09-17T00:00:00Z