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Genomic prediction in maize breeding populations with genotyping-by-sequencing

Genomic prediction in maize breeding populations with genotyping-by-sequencing

http://www.wikidata.org/entity/Q37272913

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Emerging Genomic Tools for Legume Breeding: Current Status and Future Prospects Genotyping by sequencing approaches to characterise crop genomes: choosing the right tool for the right application Accuracy of Genomic Selection in a Rice Synthetic Population Developed for Recurrent Selection Breeding.Prediction accuracies for growth and wood attributes of interior spruce in space using genotyping-by-sequencing.Scanning and Filling: Ultra-Dense SNP Genotyping Combining Genotyping-By-Sequencing, SNP Array and Whole-Genome Resequencing Data.Construction of relatedness matrices using genotyping-by-sequencing data.Bioinformatic analysis of genotype by sequencing (GBS) data with NGSEP.Genomic Prediction of Gene Bank Wheat Landraces Dissecting the genetic architecture of Fusarium verticillioides seed rot resistance in maize by combining QTL mapping and genome-wide association analysis.High Density Linkage Map Construction and Mapping of Yield Trait QTLs in Maize (Zea mays) Using the Genotyping-by-Sequencing (GBS) Technology Construction of genotyping-by-sequencing based high-density genetic maps and QTL mapping for fusarium wilt resistance in pigeonpea.Genetic Gains in Grain Yield of a Maize Population Improved through Marker Assisted Recurrent Selection under Stress and Non-stress Conditions in West Africa.Harvesting the promising fruits of genomics: applying genome sequencing technologies to crop breeding Genotyping by sequencing for genomic prediction in a soybean breeding population.Flexible and scalable genotyping-by-sequencing strategies for population studies solGS: a web-based tool for genomic selection.Employing genome-wide SNP discovery and genotyping strategy to extrapolate the natural allelic diversity and domestication patterns in chickpea.A genome-wide SNP scan accelerates trait-regulatory genomic loci identification in chickpea.Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea Genotyping-by-sequencing map permits identification of clubroot resistance QTLs and revision of the reference genome assembly in cabbage (Brassica oleracea L.).Genome-wide high-throughput SNP discovery and genotyping for understanding natural (functional) allelic diversity and domestication patterns in wild chickpea Initiating maize pre-breeding programs using genomic selection to harness polygenic variation from landrace populations Evaluation of the 2b-RAD method for genomic selection in scallop breeding.SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population.Genome-wide association and genomic prediction of resistance to maize lethal necrosis disease in tropical maize germplasm.Genomic Prediction of Seed Quality Traits Using Advanced Barley Breeding Lines.Numerous genetic loci identified for drought tolerance in the maize nested association mapping populations.Ecological genomics of local adaptation in Cornus florida L. by genotyping by sequencing.GBS-based single dosage markers for linkage and QTL mapping allow gene mining for yield-related traits in sugarcane High-density linkage map construction and mapping of seed trait QTLs in chickpea (Cicer arietinum L.) using Genotyping-by-Sequencing (GBS)Heap: a highly sensitive and accurate SNP detection tool for low-coverage high-throughput sequencing data.Application of Population Sequencing (POPSEQ) for Ordering and Imputing Genotyping-by-Sequencing Markers in Hexaploid Wheat Molecular characterization of CIMMYT maize inbred lines with genotyping-by-sequencing SNPs.Genomic prediction in biparental tropical maize populations in water-stressed and well-watered environments using low-density and GBS SNPs.Multikernel linear mixed models for complex phenotype prediction.Potential of marker selection to increase prediction accuracy of genomic selection in soybean (Glycine max L.).Kernel-based whole-genome prediction of complex traits: a review Enhancing genetic gain in the era of molecular breeding.Genomic Selection in the Era of Next Generation Sequencing for Complex Traits in Plant Breeding A Variational Bayes Genomic-Enabled Prediction Model with Genotype × Environment Interaction.

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Genomic prediction in maize breeding populations with genotyping-by-sequencing

http://www.wikidata.org/entity/Q37272913

description

2013 nî lūn-bûn

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2013年の論文

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2013年学术文章

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2013年学术文章

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2013年学术文章

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2013年学术文章

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@zh-sg

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@yue

2013年學術文章

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2013年學術文章

@zh-hant

name

Genomic prediction in maize breeding populations with genotyping-by-sequencing

@en

Genomic prediction in maize breeding populations with genotyping-by-sequencing.

@nl

type

label

Genomic prediction in maize breeding populations with genotyping-by-sequencing

@en

Genomic prediction in maize breeding populations with genotyping-by-sequencing.

@nl

prefLabel

Genomic prediction in maize breeding populations with genotyping-by-sequencing

@en

Genomic prediction in maize breeding populations with genotyping-by-sequencing.

@nl

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Genomic prediction in maize breeding populations with genotyping-by-sequencing

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Charles Chen

http://www.w3.org/2001/XMLSchema#string

Gustavo de los Campos

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Jean-Luc Jannink

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John M Hickey

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Marco A Lopez Cruz

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Raman Babu

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Semagn Kassa

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Vanessa S Windhausen

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Yoseph Beyene

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Fast and accurate short read alignment with Burrows-Wheeler transform

BioJava: an open-source framework for bioinformatics

The Sequence Alignment/Map format and SAMtools

A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species

Prediction of total genetic value using genome-wide dense marker maps

Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content.

Comprehensive genotyping of the USA national maize inbred seed bank.

SNVer: a statistical tool for variant calling in analysis of pooled or individual next-generation sequencing data.

Accuracy of genomic selection in simulated populations mimicking the extent of linkage disequilibrium in beef cattle

Comparative SNP and haplotype analysis reveals a higher genetic diversity and rapider LD decay in tropical than temperate germplasm in maize

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1903-1926

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10.1534/G3.113.008227

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11

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3

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Paulino Pérez-Rodríguez

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2013-11-06T00:00:00Z

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256490728

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24022750

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3815055

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