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High-throughput SNP genotyping in the highly heterozygous genome of Eucalyptus: assay success, polymorphism and transferability across speciesA high-density SNP genotyping array for Brassica napus and its ancestral diploid species based on optimised selection of single-locus markers in the allotetraploid genomeDevelopment of a SNP array and its application to genetic mapping and diversity assessment in pepper (Capsicum spp.)Identification of genome-wide single nucleotide polymorphisms in allopolyploid crop Brassica napusSequence-based genotyping for marker discovery and co-dominant scoring in germplasm and populationsA strategy for genome-wide identification of gene based polymorphisms in rice reveals non-synonymous variation and functional genotypic markers.Exploiting next-generation sequencing to solve the haplotyping puzzle in polyploids: a simulation study.A set of EST-SNPs for map saturation and cultivar identification in melonSingle strand conformation polymorphism based SNP and Indel markers for genetic mapping and synteny analysis of common bean (Phaseolus vulgaris L.).In vitro vs in silico detected SNPs for the development of a genotyping array: what can we learn from a non-model species?SNP discovery by high-throughput sequencing in soybean.Construction and application for QTL analysis of a Restriction Site Associated DNA (RAD) linkage map in barley.A Highly Dense Genetic Map for Ginkgo biloba Constructed Using Sequence-Based MarkersDiscovery of genome-wide DNA polymorphisms in a landrace cultivar of Japonica rice by whole-genome sequencing.A high-density SNP Map of sunflower derived from RAD-sequencing facilitating fine-mapping of the rust resistance gene R12High-throughput SNP discovery and genotyping in durum wheat (Triticum durum Desf.).Genome-wide SNP discovery in tetraploid alfalfa using 454 sequencing and high resolution melting analysis.A first generation microsatellite- and SNP-based linkage map of Jatropha.Chemical and biochemical approaches in the study of histone methylation and demethylationA 48 SNP set for grapevine cultivar identification.Rapid gene-based SNP and haplotype marker development in non-model eukaryotes using 3'UTR sequencing.Transcriptome-based differentiation of closely-related Miscanthus lines.Allele discovery of ten candidate drought-response genes in Austrian oak using a systematically informatics approach based on 454 amplicon sequencingA transcriptome map of perennial ryegrass (Lolium perenne L.).Transcriptome and complexity-reduced, DNA-based identification of intraspecies single-nucleotide polymorphisms in the polyploid Gossypium hirsutum L.Large-scale transcriptome characterization and mass discovery of SNPs in globe artichoke and its related taxa.Genomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome.De novo assembly of the pepper transcriptome (Capsicum annuum): a benchmark for in silico discovery of SNPs, SSRs and candidate genes.The coding region of the UFGT gene is a source of diagnostic SNP markers that allow single-locus DNA genotyping for the assessment of cultivar identity and ancestry in grapevine (Vitis vinifera L.).Characterization of expressed sequence tags from developing fibers of Gossypium barbadense and evaluation of insertion-deletion variation in tetraploid cultivated cotton speciesDe novo sequencing of sunflower genome for SNP discovery using RAD (Restriction site Associated DNA) approach.Single-nucleotide polymorphism identification and genotyping in Camelina sativa.Use of targeted SNP selection for an improved anchoring of the melon (Cucumis melo L.) scaffold genome assembly.Genomic DNA enrichment using sequence capture microarrays: a novel approach to discover sequence nucleotide polymorphisms (SNP) in Brassica napus L.Transcriptome sequencing for high throughput SNP development and genetic mapping in Pea.An SNP-based saturated genetic map and QTL analysis of fruit-related traits in cucumber using specific-length amplified fragment (SLAF) sequencing.Sequence-based ultra-dense genetic and physical maps reveal structural variations of allopolyploid cotton genomes.A bi-filtering method for processing single nucleotide polymorphism array data improves the quality of genetic map and accuracy of quantitative trait locus mapping in doubled haploid populations of polyploid Brassica napus.Large-Scale SNP Discovery and Genotyping for Constructing a High-Density Genetic Map of Tea Plant Using Specific-Locus Amplified Fragment Sequencing (SLAF-seq).Association of Agronomic Traits with SNP Markers in Durum Wheat (Triticum turgidum L. durum (Desf.)).
P2860
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P2860
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
@tr
scientific article published on 29 January 2009
@en
vedecký článok
@sk
vetenskaplig artikel
@sv
videnskabelig artikel
@da
vědecký článek
@cs
name
SNP identification in crop plants.
@en
SNP identification in crop plants.
@nl
type
label
SNP identification in crop plants.
@en
SNP identification in crop plants.
@nl
prefLabel
SNP identification in crop plants.
@en
SNP identification in crop plants.
@nl
P1476
SNP identification in crop plants
@en
P2093
Martin W Ganal
Thomas Altmann
P304
P356
10.1016/J.PBI.2008.12.009
P577
2009-01-29T00:00:00Z