Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Escherichia coli
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Advances in Molecular Serotyping and Subtyping of Escherichia coliDetection, Characterization, and Typing of Shiga Toxin-Producing Escherichia coliWhole-genome sequencing targets drug-resistant bacterial infectionsThe Complete Genome Sequence of the Murine Pathobiont Helicobacter typhlonius.Bacterial whole genome-based phylogeny: construction of a new benchmarking dataset and assessment of some existing methodsGeneSippr: a rapid whole-genome approach for the identification and characterization of foodborne pathogens such as priority Shiga toxigenic Escherichia coliDraft Genome Sequence of Streptococcus sp. X13SY08, Isolated from Murray Cod (Maccullochella peelii peelii)Utility of Whole-Genome Sequencing of Escherichia coli O157 for Outbreak Detection and Epidemiological SurveillanceDraft Whole-Genome Sequences of Escherichia fergusonii Strains Isolated from Beef Trim (GTA-EF02), Ground Beef (GTA-EF03), and Chopped Kale (GTA-EF04)Virulence factor activity relationships (VFARs): a bioinformatics perspective.Navigating Microbiological Food Safety in the Era of Whole-Genome SequencingCarriage of Extended-Spectrum Beta-Lactamase-Plasmids Does Not Reduce Fitness but Enhances Virulence in Some Strains of Pandemic E. coli Lineages.Tackling Drug Resistant Infection Outbreaks of Global Pandemic Escherichia coli ST131 Using Evolutionary and Epidemiological Genomics.Multiplexed Single Intact Cell Droplet Digital PCR (MuSIC ddPCR) Method for Specific Detection of Enterohemorrhagic E. coli (EHEC) in Food Enrichment Cultures.Bacteriophages from ExPEC Reservoirs Kill Pandemic Multidrug-Resistant Strains of Clonal Group ST131 in Animal Models of BacteremiaSingle-molecule sequencing reveals the molecular basis of multidrug-resistance in ST772 methicillin-resistant Staphylococcus aureus.Elucidation of quantitative structural diversity of remarkable rearrangement regions, shufflons, in IncI2 plasmidsSalmonella serotype determination utilizing high-throughput genome sequencing data.Rapid and Easy In Silico Serotyping of Escherichia coli Isolates by Use of Whole-Genome Sequencing DataWhole-Genome Sequencing Data for Serotyping Escherichia coli-It's Time for a Change!A Bacterial Analysis Platform: An Integrated System for Analysing Bacterial Whole Genome Sequencing Data for Clinical Diagnostics and SurveillanceAnalysis of Metagenomics Next Generation Sequence Data for Fungal ITS Barcoding: Do You Need Advance Bioinformatics Experience?Single-Nucleotide Polymorphisms in the Whole-Genome Sequence Data of Shiga Toxin-Producing Escherichia coli O157:H7/H- Strains by Cultivation.Hybrids of Shigatoxigenic and Enterotoxigenic Escherichia coli (STEC/ETEC) Among Human and Animal Isolates in Finland.Recurrent Hemolytic and Uremic Syndrome Induced by Escherichia ColiA Geographically Widespread Outbreak Investigation and Development of a Rapid Screening Method Using Whole Genome Sequences of Enterohemorrhagic Escherichia coli O121.Draft Whole-Genome Sequences of Multidrug-Resistant Escherichia coli O157:H7 Strains Isolated from Feedlot Cattle Treated with Growth-Promoting Agents.Draft Genome Sequence of a Sequence Type 398 Methicillin-Resistant Staphylococcus aureus Isolate from a Danish Dairy Cow with Mastitis.PulseNet International: Vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillanceEvaluating next-generation sequencing for direct clinical diagnostics in diarrhoeal disease.Whole-genome sequencing to control antimicrobial resistanceWGS Analysis and Interpretation in Clinical and Public Health Microbiology Laboratories: What Are the Requirements and How Do Existing Tools Compare?Comparative analysis of subtyping methods against a whole-genome-sequencing standard for Salmonella enterica serotype EnteritidisPhenotypic and genotypic analysis of Clostridium difficile isolates: a single-center study.Insight into Shiga toxin genes encoded by Escherichia coli O157 from whole genome sequencingMycobacterial DNA extraction for whole-genome sequencing from early positive liquid (MGIT) cultures.Solving the problem of comparing whole bacterial genomes across different sequencing platforms.Proficiency testing for bacterial whole genome sequencing: an end-user survey of current capabilities, requirements and priorities.Draft Genome Sequences of Vibrio alginolyticus Strains V1 and V2, Opportunistic Marine Pathogens.Draft Genome Sequence of Vibrio parahaemolyticus VH3, Isolated from an Aquaculture Environment in Greece.
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Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Escherichia coli
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
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scientific article published on 26 February 2014
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vedecký článok
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vetenskaplig artikel
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videnskabelig artikel
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vědecký článek
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name
Real-time whole-genome sequenc ...... verotoxigenic Escherichia coli
@en
Real-time whole-genome sequenc ...... erotoxigenic Escherichia coli.
@nl
type
label
Real-time whole-genome sequenc ...... verotoxigenic Escherichia coli
@en
Real-time whole-genome sequenc ...... erotoxigenic Escherichia coli.
@nl
prefLabel
Real-time whole-genome sequenc ...... verotoxigenic Escherichia coli
@en
Real-time whole-genome sequenc ...... erotoxigenic Escherichia coli.
@nl
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Real-time whole-genome sequenc ...... verotoxigenic Escherichia coli
@en
P2860
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10.1128/JCM.03617-13
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P577
2014-02-26T00:00:00Z