Automatic extraction of mutations from Medline and cross-validation with OMIM. - Wikidata - wikimedia - TriplyDB

Automatic extraction of mutations from Medline and cross-validation with OMIM.

Automatic extraction of mutations from Medline and cross-validation with OMIM.

http://www.wikidata.org/entity/Q40695112

about

Challenges in the association of human single nucleotide polymorphism mentions with unique database identifiers An examination of the OMIM database for associating mutation to a consensus reference sequence Facts from text--is text mining ready to deliver?Getting personalized cancer genome analysis into the clinic: the challenges in bioinformatics The HIV mutation browser: a resource for human immunodeficiency virus mutagenesis and polymorphism data Benchmarking infrastructure for mutation text mining Automatic extraction of protein point mutations using a graph bigram association.A workflow for mutation extraction and structure annotation.Improved mutation tagging with gene identifiers applied to membrane protein stability prediction Interpretation of the consequences of mutations in protein kinases: combined use of bioinformatics and text mining.Toward an automatic method for extracting cancer- and other disease-related point mutations from the biomedical literature.MutationFinder: a high-performance system for extracting point mutation mentions from text.Gene-L'EXPO: a tool to extract knowledge From transcriptomes and find 'Literature-Sparse' relationships between genes and tissues.The energy landscape analysis of cancer mutations in protein kinases SYMBIOmatics: synergies in Medical Informatics and Bioinformatics--exploring current scientific literature for emerging topics.Deafness mutation mining using regular expression based pattern matching.Identification and analysis of co-occurrence networks with NetCutter.Between proteins and phenotypes: annotation and interpretation of mutations.Extraction of human kinase mutations from literature, databases and genotyping studies.EnzyMiner: automatic identification of protein level mutations and their impact on target enzymes from PubMed abstracts Annotation of protein residues based on a literature analysis: cross-validation against UniProtKb.Sequence and structure signatures of cancer mutation hotspots in protein kinases Algorithms and semantic infrastructure for mutation impact extraction and grounding.Automated extraction and semantic analysis of mutation impacts from the biomedical literature.tmVar: a text mining approach for extracting sequence variants in biomedical literature.Text mining facilitates database curation - extraction of mutation-disease associations from Bio-medical literature DiMeX: A Text Mining System for Mutation-Disease Association Extraction.Literature mining of protein-residue associations with graph rules learned through distant supervision Medical informatics and bioinformatics: a bibliometric study.Antisense oligonucleotides: from design to therapeutic application.OSIRISv1.2: a named entity recognition system for sequence variants of genes in biomedical literature Towards precision medicine: advances in computational approaches for the analysis of human variants The curation of genetic variants: difficulties and possible solutions.Structure-functional prediction and analysis of cancer mutation effects in protein kinases.Towards a systematic evaluation of protein mutation extraction systems.Positional effects and strand preference of RNA interference against hepatitis C virus target sequences.Identification of universal selectivity-determining positions in cytochrome P450 monooxygenases by systematic sequence-based literature mining.Intrinsic evaluation of text mining tools may not predict performance on realistic tasks.Prospects for the automated extraction of mutation data from the scientific literature.ABCMdb: a database for the comparative analysis of protein mutations in ABC transporters, and a potential framework for a general application.

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P2860

Automatic extraction of mutations from Medline and cross-validation with OMIM.

http://www.wikidata.org/entity/Q40695112

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2004年の論文

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Automatic extraction of mutations from Medline and cross-validation with OMIM.

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Automatic extraction of mutations from Medline and cross-validation with OMIM.

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Automatic extraction of mutations from Medline and cross-validation with OMIM.

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Automatic extraction of mutations from Medline and cross-validation with OMIM.

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Georg Casari

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Harald Kirsch

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Sylvie Albert

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P2860

EDGAR: extraction of drugs, genes and relations from the biomedical literature

A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms

Information extraction in molecular biology.

Association of genes to genetically inherited diseases using data mining.

Extracting synonymous gene and protein terms from biological literature.

Automatic extraction of biological information from scientific text: protein-protein interactions.

Automated extraction of information in molecular biology.

Information technology tools for efficient SNP studies.

Disambiguating proteins, genes, and RNA in text: a machine learning approach.

Mining literature for protein-protein interactions.

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