Slow conformational dynamics at C2'-endo nucleotides in RNA. - Wikidata - wikimedia - TriplyDB

Slow conformational dynamics at C2'-endo nucleotides in RNA.

Slow conformational dynamics at C2'-endo nucleotides in RNA.

http://www.wikidata.org/entity/Q41479325

about

Csy4 relies on an unusual catalytic dyad to position and cleave CRISPR RNA Structure-function analysis of ribonucleotide bypass by B family DNA replicases Structural Impact of Single Ribonucleotide Residues in DNA On the significance of an RNA tertiary structure prediction.Advances in RNA structure analysis by chemical probing.RNA approaches the B-form in stacked single strand dinucleotide contexts.Multi-domain packing in the aminoacylatable 3' end of a plant viral RNA Exploring RNA structural codes with SHAPE chemistry.Revisiting plus-strand DNA synthesis in retroviruses and long terminal repeat retrotransposons: dynamics of enzyme: substrate interactions.Assembly of the five-way junction in the ribosomal small subunit using hybrid MD-Gō simulations Global shape mimicry of tRNA within a viral internal ribosome entry site mediates translational reading frame selection.The cellular environment stabilizes adenine riboswitch RNA structure Selective 2'-hydroxyl acylation analyzed by protection from exoribonuclease (RNase-detected SHAPE) for direct analysis of covalent adducts and of nucleotide flexibility in RNA Time-resolved RNA SHAPE chemistry: quantitative RNA structure analysis in one-second snapshots and at single-nucleotide resolution Influence of nucleotide identity on ribose 2'-hydroxyl reactivity in RNA SHAMS: combining chemical modification of RNA with mass spectrometry to examine polypurine tract-containing RNA/DNA hybrids.C2'-endo nucleotides as molecular timers suggested by the folding of an RNA domain.Molecular crowders and cosolutes promote folding cooperativity of RNA under physiological ionic conditions.Fingerprinting the junctions of RNA structure by an open-paddlewheel diruthenium compound.RNA secondary structure modeling at consistent high accuracy using differential SHAPE.SHAPE analysis of the htrA RNA thermometer from Salmonella enterica.Safer one-pot synthesis of the 'SHAPE' reagent 1-methyl-7-nitroisatoic anhydride (1m7).Secondary structure of bacteriophage T4 gene 60 mRNA: implications for translational bypassing.Mechanistic role of structurally dynamic regions in Dicistroviridae IGR IRESs.Variable sequences outside the SAM-binding core critically influence the conformational dynamics of the SAM-III/SMK box riboswitch.Fingerprinting noncanonical and tertiary RNA structures by differential SHAPE reactivity.Strong correlation between SHAPE chemistry and the generalized NMR order parameter (S2) in RNA Principles for understanding the accuracy of SHAPE-directed RNA structure modeling.Molecular Dynamics Simulations Reveal an Interplay between SHAPE Reagent Binding and RNA Flexibility.Ribosome-dependent conformational flexibility changes and RNA dynamics of IRES domains revealed by differential SHAPE.

P2860

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P2860

Slow conformational dynamics at C2'-endo nucleotides in RNA.

http://www.wikidata.org/entity/Q41479325

description

2008 nî lūn-bûn

@nan

2008年の論文

@ja

2008年論文

@yue

2008年論文

@zh-hant

2008年論文

@zh-hk

2008年論文

@zh-mo

2008年論文

@zh-tw

2008年论文

@wuu

2008年论文

@zh

2008年论文

@zh-cn

name

Slow conformational dynamics at C2'-endo nucleotides in RNA.

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type

label

Slow conformational dynamics at C2'-endo nucleotides in RNA.

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prefLabel

Slow conformational dynamics at C2'-endo nucleotides in RNA.

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Journal of the American Chemical Society

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Slow conformational dynamics at C2'-endo nucleotides in RNA.

@en

P2093

Costin M Gherghe

http://www.w3.org/2001/XMLSchema#string

Joseph M Krahn

http://www.w3.org/2001/XMLSchema#string

Kevin M Weeks

http://www.w3.org/2001/XMLSchema#string

Nancy L Thompson

http://www.w3.org/2001/XMLSchema#string

Stefanie A Mortimer

http://www.w3.org/2001/XMLSchema#string

P2860

RNA backbone: consensus all-angle conformers and modular string nomenclature (an RNA Ontology Consortium contribution)

Crystal structure of the specificity domain of ribonuclease P

NMR Structures of (rGC U GA G GCU) 2 and (rGC G GA U GCU) 2 : Probing the Structural Features That Shape the Thermodynamic Stability of GA Pairs † , ‡

Structure of (rGGCGAGCC)2 in solution from NMR and restrained molecular dynamics

Prolyl cis-trans isomerization as a molecular timer

Selective 2'-hydroxyl acylation analyzed by primer extension (SHAPE): quantitative RNA structure analysis at single nucleotide resolution

RNA structure analysis at single nucleotide resolution by selective 2'-hydroxyl acylation and primer extension (SHAPE)

Local RNA structural changes induced by crystallization are revealed by SHAPE

A fast-acting reagent for accurate analysis of RNA secondary and tertiary structure by SHAPE chemistry.

NMR studies of dynamics in RNA and DNA by 13C relaxation.

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8884-8885

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10.1021/JA802691E

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28

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130

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2008-06-18T00:00:00Z

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18558680

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4501255

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