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A primer on metagenomicsState of the art de novo assembly of human genomes from massively parallel sequencing dataShort-Read Sequencing for Genomic Analysis of the Brown Rot Fungus Fibroporia radiculosaOptimization of de novo transcriptome assembly from next-generation sequencing dataRay: simultaneous assembly of reads from a mix of high-throughput sequencing technologiesEfficient de novo assembly of large genomes using compressed data structuresSPAdes: a new genome assembly algorithm and its applications to single-cell sequencingEfficient de novo assembly of single-cell bacterial genomes from short-read data setsDe novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzaeDetermination of tag density required for digital transcriptome analysis: application to an androgen-sensitive prostate cancer modelDe novo assembly of human genomes with massively parallel short read sequencingBest practices for evaluating single nucleotide variant calling methods for microbial genomicsBayesHammer: Bayesian clustering for error correction in single-cell sequencingWhole-genome assembly of Akkermansia muciniphila sequenced directly from human stoolThe impact of next-generation sequencing technology on geneticsValidation of high throughput sequencing and microbial forensics applications.Single cell genome amplification accelerates identification of the apratoxin biosynthetic pathway from a complex microbial assemblageEvaluation of genome sequencing quality in selected plant species using expressed sequence tagsComparing de novo genome assembly: the long and short of itEvaluation of methods for de novo genome assembly from high-throughput sequencing reads reveals dependencies that affect the quality of the resultsMeraculous: de novo genome assembly with short paired-end readsDesign, validation and annotation of transcriptome-wide oligonucleotide probes for the oligochaete annelid Eisenia fetidaHow to apply de Bruijn graphs to genome assemblyABySS: a parallel assembler for short read sequence dataPindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short readsTransforming clinical microbiology with bacterial genome sequencing.Characterization of quasispecies of pandemic 2009 influenza A virus (A/H1N1/2009) by de novo sequencing using a next-generation DNA sequencer.BM-BC: a Bayesian method of base calling for Solexa sequence dataNext-generation sequence assembly: four stages of data processing and computational challengesA memory-efficient algorithm to obtain splicing graphs and de novo expression estimates from de Bruijn graphs of RNA-Seq dataCorrecting Illumina data.De novo genome assembly of the economically important weed horseweed using integrated data from multiple sequencing platforms.Sequence assembly using next generation sequencing data--challenges and solutions.NeatFreq: reference-free data reduction and coverage normalization for De Novo sequence assembly.Rapid evaluation and quality control of next generation sequencing data with FaQCs.Comparative analysis of the complete sequence of the plastid genome of Parthenium argentatum and identification of DNA barcodes to differentiate Parthenium species and lines.SeedsGraph: an efficient assembler for next-generation sequencing data.Konnector v2.0: pseudo-long reads from paired-end sequencing data.Heuristic pairwise alignment of de Bruijn graphs to facilitate simultaneous transcript discovery in related organisms from RNA-Seq data.Simple tools for assembling and searching high-density picolitre pyrophosphate sequence data
P2860
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P2860
description
2007 nî lūn-bûn
@nan
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
2007年论文
@zh
2007年论文
@zh-cn
name
Short read fragment assembly of bacterial genomes.
@en
type
label
Short read fragment assembly of bacterial genomes.
@en
prefLabel
Short read fragment assembly of bacterial genomes.
@en
P2860
P356
P1433
P1476
Short read fragment assembly of bacterial genomes.
@en
P2093
Mark J Chaisson
Pavel A Pevzner
P2860
P304
P356
10.1101/GR.7088808
P577
2007-12-14T00:00:00Z