A novel methodology for large-scale phylogeny partition. - Wikidata - wikimedia - TriplyDB

A novel methodology for large-scale phylogeny partition.

A novel methodology for large-scale phylogeny partition.

http://www.wikidata.org/entity/Q45822128

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Combining epidemiological and genetic networks signifies the importance of early treatment in HIV-1 transmission Phylodynamic analysis reveals CRF01_AE dissemination between Japan and neighboring Asian countries and the role of intravenous drug use in transmission HIV-1 diversity, transmission dynamics and primary drug resistance in Angola Dispersion of the HIV-1 Epidemic in Men Who Have Sex with Men in the Netherlands: A Combined Mathematical Model and Phylogenetic Analysis Composite bacterial hopanoids and their microbial producers across oxygen gradients in the water column of the California Current The global transmission network of HIV-1 Evolution of the H9N2 influenza genotype that facilitated the genesis of the novel H7N9 virus.A single early introduction of HIV-1 subtype B into Central America accounts for most current cases Detectable signals of episodic risk effects on acute HIV transmission: strategies for analyzing transmission systems using genetic data.Phylogenetic Investigation of a Statewide HIV-1 Epidemic Reveals Ongoing and Active Transmission Networks Among Men Who Have Sex With Men.Deciphering the distance to antibiotic resistance for the pneumococcus using genome sequencing data The evolution of function within the Nudix homology clan.Defining HIV-1 transmission clusters based on sequence data.Phylogenetic clustering of hepatitis C virus among people who inject drugs in Vancouver, Canada Automated analysis of phylogenetic clusters.Phylogenetic relatedness of circulating HIV-1C variants in Mochudi, Botswana Transmission of Hepatitis C Virus among Prisoners, Australia, 2005-2012.Genome-wide comparative analysis reveals similar types of NBS genes in hybrid Citrus sinensis genome and original Citrus clementine genome and provides new insights into non-TIR NBS genes.Long-Range HIV Genotyping Using Viral RNA and Proviral DNA for Analysis of HIV Drug Resistance and HIV Clustering.Assessment of Overlap of Phylogenetic Transmission Clusters and Communities in Simple Sexual Contact Networks: Applications to HIV-1.Limited cross-border infections in patients newly diagnosed with HIV in Europe Evolutionary Dynamics and Complicated Genetic Transmission Network Patterns of HIV-1 CRF01_AE among MSM in Shanghai, China.Thermodynamic and phylogenetic insights into hnRNP A1 recognition of the HIV-1 exon splicing silencer 3 element.Identifying Transmission Clusters with Cluster Picker and HIV-TRACE.Impacts and shortcomings of genetic clustering methods for infectious disease outbreaks.Phylogenetic analysis of full-length, early infection, hepatitis C virus genomes among people with intravenous drug use: the InC3 Study.Global phylogeography and evolutionary history of Shigella dysenteriae type 1.Biased phylodynamic inferences from analysing clusters of viral sequences.Importance of Viral Sequence Length and Number of Variable and Informative Sites in Analysis of HIV Clustering.A high-density SNP panel reveals extensive diversity, frequent recombination and multiple recombination hotspots within the chicken major histocompatibility complex B region between BG2 and CD1A1.The evolution of Lachancea thermotolerans is driven by geographical determination, anthropisation and flux between different ecosystems.TreeParser-aided Klee diagrams display taxonomic clusters in DNA barcode and nuclear gene datasets.Genetic evolution of influenza H9N2 viruses isolated from various hosts in China from 1994 to 2013.Striking a balance: regulation of transposable elements by Zfp281 and Mll2 in mouse embryonic stem cells.A model-based clustering method to detect infectious disease transmission outbreaks from sequence variation.HIV-1 Infection in Cyprus, the Eastern Mediterranean European Frontier: A Densely Sampled Transmission Dynamics Analysis from 1986 to 2012.Defining objective clusters for rabies virus sequences using affinity propagation clustering.Complex patterns of Hepatitis-C virus longitudinal clustering in a high-risk population.Longitudinal genomic surveillance of MRSA in the UK reveals transmission patterns in hospitals and the community.Brettanomyces bruxellensis population survey reveals a diploid-triploid complex structured according to substrate of isolation and geographical distribution.

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P2860

A novel methodology for large-scale phylogeny partition.

http://www.wikidata.org/entity/Q45822128

description

2011 nî lūn-bûn

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2011年の論文

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2011年学术文章

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2011年学术文章

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2011年学术文章

@zh-cn

2011年学术文章

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2011年学术文章

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2011年学术文章

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2011年學術文章

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2011年學術文章

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name

A novel methodology for large-scale phylogeny partition.

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A novel methodology for large-scale phylogeny partition.

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type

label

A novel methodology for large-scale phylogeny partition.

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A novel methodology for large-scale phylogeny partition.

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prefLabel

A novel methodology for large-scale phylogeny partition.

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A novel methodology for large-scale phylogeny partition.

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Nature Communications

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A novel methodology for large-scale phylogeny partition.

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ARCA collaborative group

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Amedeo Capetti

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Angela Vivarelli

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Bianca Bruzzone

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Iuri Fanti

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Laura Sighinolfi

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Marco Salemi

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Mattia C F Prosperi

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Monica Pecorari

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Rebecca R Gray

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P2860

Episodic sexual transmission of HIV revealed by molecular phylodynamics

FastTree 2--approximately maximum-likelihood trees for large alignments

Phylodynamic analysis of human immunodeficiency virus type 1 in distinct brain compartments provides a model for the neuropathogenesis of AIDS.

Travel and the spread of HIV-1 genetic variants.

Spatial phylodynamics of HIV-1 epidemic emergence in east Africa.

Phylodynamics of HIV-1 in lymphoid and non-lymphoid tissues reveals a central role for the thymus in emergence of CXCR4-using quasispecies

Molecular phylodynamics of the heterosexual HIV epidemic in the United Kingdom.

Molecular epidemiology reveals long-term changes in HIV type 1 subtype B transmission in Switzerland.

Multiple independent lineages of HIV-1 persist in breast milk and plasma.

Assessing the effects of human mixing patterns on human immunodeficiency virus-1 interhost phylogenetics through social network simulation.

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10.1038/NCOMMS1325

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2

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Stefano Rusconi

Maria Rita Gismondo

Francesco Saladini

Simona Di Giambenedetto

Massimo Ciccozzi

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2011-05-24T00:00:00Z

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21610724

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6045912

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