Efficient computation of the first passage time distribution of the generalized master equation by steady-state relaxation.
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Enzyme Selectivity of HIV Reverse Transcriptase: Conformations, Ligands, and Free Energy PartitionA milestoning study of the kinetics of an allosteric transition: atomically detailed simulations of deoxy Scapharca hemoglobinUnassisted transport of N-acetyl-L-tryptophanamide through membrane: experiment and simulation of kinetics.Investigations of α-helix↔β-sheet transition pathways in a miniprotein using the finite-temperature string methodAtomically detailed simulation of the recovery stroke in myosin by MilestoningFree energy and kinetics of conformational transitions from Voronoi tessellated milestoning with restraining potentials.Modeling kinetics and equilibrium of membranes with fields: milestoning analysis and implication to permeation.Free energy of conformational transition paths in biomolecules: the string method and its application to myosin VI.How conformational dynamics of DNA polymerase select correct substrates: experiments and simulations.Early events in helix unfolding under external forces: a milestoning analysis.Perspective: Computer simulations of long time dynamicsAnalyzing milestoning networks for molecular kinetics: definitions, algorithms, and examples.Computational study of peptide permeation through membrane: Searching for hidden slow variables.Markovian and Non-Markovian Modeling of Membrane Dynamics with Milestoning.Milestoning without a Reaction CoordinateRevisiting and computing reaction coordinates with Directional Milestoning.Kinetics of helix unfolding: molecular dynamics simulations with milestoning.Experiments and comprehensive simulations of the formation of a helical turnExact milestoning.On the assumptions underlying milestoning.Milestoning with transition memory.Markov state models based on milestoning.Nonequilibrium umbrella sampling in spaces of many order parameters.Umbrella sampling for nonequilibrium processes.Extending molecular dynamics time scales with milestoning: example of complex kinetics in a solvated peptide.
P2860
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P2860
Efficient computation of the first passage time distribution of the generalized master equation by steady-state relaxation.
description
2006 nî lūn-bûn
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2006年の論文
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2006年学术文章
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name
Efficient computation of the f ...... on by steady-state relaxation.
@en
Efficient computation of the f ...... on by steady-state relaxation.
@nl
type
label
Efficient computation of the f ...... on by steady-state relaxation.
@en
Efficient computation of the f ...... on by steady-state relaxation.
@nl
prefLabel
Efficient computation of the f ...... on by steady-state relaxation.
@en
Efficient computation of the f ...... on by steady-state relaxation.
@nl
P2860
P356
P1476
Efficient computation of the f ...... on by steady-state relaxation.
@en
P2093
Anton K Faradjian
David Shalloway
P2860
P304
P356
10.1063/1.2161211
P407
P577
2006-02-01T00:00:00Z
P5875
P698
P818
physics/0510217