IgTree: creating Immunoglobulin variable region gene lineage trees.
about
The analysis of clonal expansions in normal and autoimmune B cell repertoiresThe Effects of Somatic Hypermutation on Neutralization and Binding in the PGT121 Family of Broadly Neutralizing HIV AntibodiesPractical guidelines for B-cell receptor repertoire sequencing analysisQuantifying evolutionary constraints on B-cell affinity maturationVDJML: a file format with tools for capturing the results of inferring immune receptor rearrangementsModels of somatic hypermutation targeting and substitution based on synonymous mutations from high-throughput immunoglobulin sequencing data.Change-O: a toolkit for analyzing large-scale B cell immunoglobulin repertoire sequencing data.LymAnalyzer: a tool for comprehensive analysis of next generation sequencing data of T cell receptors and immunoglobulins.CNS Aquaporin-4-specific B cells connect with multiple B-cell compartments in neuromyelitis optica spectrum disorder.pRESTO: a toolkit for processing high-throughput sequencing raw reads of lymphocyte receptor repertoires.Immunoglobulin class-switched B cells form an active immune axis between CNS and periphery in multiple sclerosis.Quantitative assessment of the robustness of next-generation sequencing of antibody variable gene repertoires from immunized miceAutomated cleaning and pre-processing of immunoglobulin gene sequences from high-throughput sequencing.Automated analysis of immunoglobulin genes from high-throughput sequencing: life without a templateUnifying immunology with informatics and multiscale biology.Characterizing immune repertoires by high throughput sequencing: strategies and applications.High Throughput Sequencing Analysis of the Immunoglobulin Heavy Chain Gene from Flow-Sorted B Cell Sub-Populations Define the Dynamics of Follicular Lymphoma Clonal Evolution.Utilities for High-Throughput Analysis of B-Cell Clonal Lineages.Diversity, cellular origin and autoreactivity of antibody-secreting cell population expansions in acute systemic lupus erythematosus.Complexity of the human memory B-cell compartment is determined by the versatility of clonal diversification in germinal centersB cell repertoire expansion occurs in meningeal ectopic lymphoid tissue.B cell exchange across the blood-brain barrier in multiple sclerosis.Long-lived antigen-induced IgM plasma cells demonstrate somatic mutations and contribute to long-term protection.Lineage tracing of human B cells reveals the in vivo landscape of human antibody class switching.Limited clonal relatedness between gut IgA plasma cells and memory B cells after oral immunization.SONAR: A High-Throughput Pipeline for Inferring Antibody Ontogenies from Longitudinal Sequencing of B Cell Transcripts.BRILIA: Integrated Tool for High-Throughput Annotation and Lineage Tree Assembly of B-Cell Repertoires.In multiple sclerosis, oligoclonal bands connect to peripheral B-cell responses.Computational Model Reveals Limited Correlation between Germinal Center B-Cell Subclone Abundancy and Affinity: Implications for Repertoire SequencingA major hindrance in antibody affinity maturation investigation: we never succeeded in falsifying the hypothesis of single-step selection.Aging affects B-cell antigen receptor repertoire diversity in primary and secondary lymphoid tissues.Studying Antibody Repertoires with Next-Generation Sequencing.Genetic background and evolution of relapses in aggressive B-cell lymphomas.Immunoglobulin gene repertoire diversification and selection in the stomach - from gastritis to gastric lymphomas.Human Secretory IgM Emerges from Plasma Cells Clonally Related to Gut Memory B Cells and Targets Highly Diverse Commensals.Hierarchy in somatic mutations arising during genomic evolution and progression of follicular lymphomaAntibody-specific model of amino acid substitution for immunological inferences from alignments of antibody sequences.Molecular footprints of a germinal center derivation of human IgM+(IgD+)CD27+ B cells and the dynamics of memory B cell generation.Integrating B cell lineage information into statistical tests for detecting selection in Ig sequencesEvidence for large diversity in the human transcriptome created by Alu RNA editing.
P2860
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P2860
IgTree: creating Immunoglobulin variable region gene lineage trees.
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年学术文章
@wuu
2008年学术文章
@zh
2008年学术文章
@zh-cn
2008年学术文章
@zh-hans
2008年学术文章
@zh-my
2008年学术文章
@zh-sg
2008年學術文章
@yue
2008年學術文章
@zh-hant
name
IgTree: creating Immunoglobulin variable region gene lineage trees.
@en
IgTree: creating Immunoglobulin variable region gene lineage trees.
@nl
type
label
IgTree: creating Immunoglobulin variable region gene lineage trees.
@en
IgTree: creating Immunoglobulin variable region gene lineage trees.
@nl
prefLabel
IgTree: creating Immunoglobulin variable region gene lineage trees.
@en
IgTree: creating Immunoglobulin variable region gene lineage trees.
@nl
P2093
P1476
IgTree: creating Immunoglobulin variable region gene lineage trees.
@en
P2093
Hanna Edelman
Michal Barak
Neta S Zuckerman
Ramit Mehr
P356
10.1016/J.JIM.2008.06.006
P577
2008-08-14T00:00:00Z