Bidirectional reaction steps in metabolic networks: IV. Optimal design of isotopomer labeling experiments. - Wikidata - wikimedia - TriplyDB

Bidirectional reaction steps in metabolic networks: IV. Optimal design of isotopomer labeling experiments.

Bidirectional reaction steps in metabolic networks: IV. Optimal design of isotopomer labeling experiments.

http://www.wikidata.org/entity/Q52136732

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13C-tracer and gas chromatography-mass spectrometry analyses reveal metabolic flux distribution in the oleaginous microalga Chlorella protothecoides Large-scale prediction of phenotype: concept.A priori analysis of metabolic flux identifiability from (13)C-labeling data.Efficient Modeling of MS/MS Data for Metabolic Flux Analysis Genealogy profiling through strain improvement by using metabolic network analysis: metabolic flux genealogy of several generations of lysine-producing corynebacteria.Estimation of flux ratios without uptake or release data: Application to serine and methionine metabolism.Cumulative bondomers: a new concept in flux analysis from 2D [13C,1H] COSY NMR data.Integration of enzyme kinetic models and isotopomer distribution analysis for studies of in situ cell operation.The topology of metabolic isotope labeling networks.13C labeling experiments at metabolic nonstationary conditions: an exploratory study.Hybrid optimization for 13C metabolic flux analysis using systems parametrized by compactification.An analytic and systematic framework for estimating metabolic flux ratios from 13C tracer experiments Metabolic fluxes during strong carbon catabolite repression by malate in Bacillus subtilis.A systematic investigation of Escherichia coli central carbon metabolism in response to superoxide stress Fluxomers: a new approach for 13C metabolic flux analysis Global metabolic effects of glycerol kinase overexpression in rat hepatoma cells.Pathway analysis and metabolic engineering in Corynebacterium glutamicum.Metabolic flux responses to pyruvate kinase knockout in Escherichia coli Predicting outcomes of steady-state ¹³C isotope tracing experiments using Monte Carlo sampling.Rational design of ¹³C-labeling experiments for metabolic flux analysis in mammalian cells OpenFLUX2: (13)C-MFA modeling software package adjusted for the comprehensive analysis of single and parallel labeling experiments Simultaneous parameters identifiability and estimation of an E. coli metabolic network model.Metabolic modelling in the development of cell factories by synthetic biology.Fluxome study of Pseudomonas fluorescens reveals major reorganisation of carbon flux through central metabolic pathways in response to inactivation of the anti-sigma factor MucA.Metabolic networks in motion: 13C-based flux analysis Theoretical Basis for Dynamic Label Propagation in Stationary Metabolic Networks under Step and Periodic Inputs.SUMOFLUX: A Generalized Method for Targeted 13C Metabolic Flux Ratio Analysis Simultaneous tracing of carbon and nitrogen isotopes in human cells INCA: a computational platform for isotopically non-stationary metabolic flux analysis.The benefits of being transient: isotope-based metabolic flux analysis at the short time scale.Comparative 13C metabolic flux analysis of pyruvate dehydrogenase complex-deficient, L-valine-producing Corynebacterium glutamicum.To be certain about the uncertainty: Bayesian statistics for 13 C metabolic flux analysis.Understanding metabolism with flux analysis: From theory to application.Mapping photoautotrophic metabolism with isotopically nonstationary (13)C flux analysis Metabolic flux responses to genetic modification for shikimic acid production by Bacillus subtilis strains.Designer labels for plant metabolism: statistical design of isotope labeling experiments for improved quantification of flux in complex plant metabolic networks.Collisional fragmentation of central carbon metabolites in LC-MS/MS increases precision of ¹³C metabolic flux analysis.Optimal tracers for parallel labeling experiments and (13)C metabolic flux analysis: A new precision and synergy scoring system.Kinetic isotope effects significantly influence intracellular metabolite (13) C labeling patterns and flux determination.Cutting the Gordian Knot: Identifiability of anaplerotic reactions in Corynebacterium glutamicum by means of (13) C-metabolic flux analysis.

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P2860

Bidirectional reaction steps in metabolic networks: IV. Optimal design of isotopomer labeling experiments.

http://www.wikidata.org/entity/Q52136732

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Biotechnology and Bioengineering

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Kownatzki D

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P2860

Metabolic fluxes in riboflavin-producing Bacillus subtilis.

Modeling isotopomer distributions in biochemical networks using isotopomer mapping matrices.

Cerebral metabolism of [1,2-13C2]glucose and [U-13C4]3-hydroxybutyrate in rat brain as detected by 13C NMR spectroscopy.

Bidirectional reaction steps in metabolic networks: II. Flux estimation and statistical analysis.

Experimental design for the identification of macrokinetic models and model discrimination.

Bidirectional reaction steps in metabolic networks: I. Modeling and simulation of carbon isotope labeling experiments.

Determination of the fluxes in the central metabolism of Corynebacterium glutamicum by nuclear magnetic resonance spectroscopy combined with metabolite balancing.

Biosynthetically directed fractional 13C-labeling of proteinogenic amino acids. An efficient analytical tool to investigate intermediary metabolism.

Flux partitioning in the split pathway of lysine synthesis in Corynebacterium glutamicum. Quantification by 13C- and 1H-NMR spectroscopy.

Mass isotopomer analysis: theoretical and practical considerations.

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