Improved visualization of protein consensus sequences by iceLogo
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NatF contributes to an evolutionary shift in protein N-terminal acetylation and is important for normal chromosome segregationProteome-wide lysine acetylation in cortical astrocytes and alterations that occur during infection with brain parasite Toxoplasma gondiiSecreted protein kinasesRecent findings and technological advances in phosphoproteomics for cells and tissuesCysteine and Aspartyl Proteases Contribute to Protein Digestion in the Gut of Freshwater PlanariaGlobal Phosphoproteomic Mapping of Early Mitotic Exit in Human Cells Identifies Novel Substrate Dephosphorylation MotifsA molecular basis for the association of the HLA-DRB1 locus, citrullination, and rheumatoid arthritisNSP4, an elastase-related protease in human neutrophils with arginine specificityA proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory rolesComparative large scale characterization of plant versus mammal proteins reveals similar and idiosyncratic N-α-acetylation featuresA Saccharomyces cerevisiae model reveals in vivo functional impairment of the Ogden syndrome N-terminal acetyltransferase NAA10 Ser37Pro mutantProteome-derived peptide libraries allow detailed analysis of the substrate specificities of N(alpha)-acetyltransferases and point to hNaa10p as the post-translational actin N(alpha)-acetyltransferaseNew details of HCV NS3/4A proteinase functionality revealed by a high-throughput cleavage assayGlobal substrate profiling of proteases in human neutrophil extracellular traps reveals consensus motif predominantly contributed by elastaseSubstrate-driven mapping of the degradome by comparison of sequence logosAn Unusual Member of the Papain Superfamily: Mapping the Catalytic Cleft of the Marasmius oreades agglutinin (MOA) with a Caspase InhibitorSIRT5 regulates the mitochondrial lysine succinylome and metabolic networksThe Online Protein Processing Resource (TOPPR): a database and analysis platform for protein processing eventsAlgal MIPs, high diversity and conserved motifsIn Vivo Phosphoproteomics Analysis Reveals the Cardiac Targets of -Adrenergic Receptor SignalingProteome-wide analysis of arginine monomethylation reveals widespread occurrence in human cellsTemporal proteomics of NGF-TrkA signaling identifies an inhibitory role for the E3 ligase Cbl-b in neuroblastoma cell differentiationProteomic Analysis of Arginine Methylation Sites in Human Cells Reveals Dynamic Regulation During Transcriptional ArrestIdentification of STN7/STN8 kinase targets reveals connections between electron transport, metabolism and gene expression.DiffLogo: a comparative visualization of sequence motifsIdentification of protein N-termini in Cyanophora paradoxa cyanelles: transit peptide composition and sequence determinants for precursor maturation.An improved workflow for quantitative N-terminal charge-based fractional diagonal chromatography (ChaFRADIC) to study proteolytic events in Arabidopsis thaliana.Proteome TopFIND 3.0 with TopFINDer and PathFINDer: database and analysis tools for the association of protein termini to pre- and post-translational events.Multiplex N-terminome analysis of MMP-2 and MMP-9 substrate degradomes by iTRAQ-TAILS quantitative proteomicsProteome-derived peptide libraries to study the substrate specificity profiles of carboxypeptidases.Granzyme M targets topoisomerase II alpha to trigger cell cycle arrest and caspase-dependent apoptosis.SELPHI: correlation-based identification of kinase-associated networks from global phospho-proteomics data sets.Determinants of Macromolecular Specificity from Proteomics-Derived Peptide Substrate Data.Proteomic protease specificity profiling of clostridial collagenases reveals their intrinsic nature as dedicated degraders of collagen.The Rational Design of Therapeutic Peptides for Aminopeptidase N using a Substrate-Based Approach.Predicting success of oligomerized pool engineering (OPEN) for zinc finger target site sequences.Characterization of the prime and non-prime active site specificities of proteases by proteome-derived peptide libraries and tandem mass spectrometry.compomics-utilities: an open-source Java library for computational proteomicsIdentification and characterization of AckA-dependent protein acetylation in Neisseria gonorrhoeae.A statistics-based platform for quantitative N-terminome analysis and identification of protease cleavage products
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P2860
Improved visualization of protein consensus sequences by iceLogo
description
im November 2009 veröffentlichter wissenschaftlicher Artikel
@de
wetenschappelijk artikel
@nl
наукова стаття, опублікована в листопаді 2009
@uk
name
Improved visualization of protein consensus sequences by iceLogo
@en
Improved visualization of protein consensus sequences by iceLogo
@nl
type
label
Improved visualization of protein consensus sequences by iceLogo
@en
Improved visualization of protein consensus sequences by iceLogo
@nl
prefLabel
Improved visualization of protein consensus sequences by iceLogo
@en
Improved visualization of protein consensus sequences by iceLogo
@nl
P2093
P2860
P356
P1433
P1476
Improved visualization of protein consensus sequences by iceLogo
@en
P2093
Joël Vandekerckhove
Kris Gevaert
Niklaas Colaert
P2860
P2888
P304
P356
10.1038/NMETH1109-786
P577
2009-11-01T00:00:00Z