Conceptual framework and pilot study to benchmark phylogenomic databases based on reference gene trees
about
OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologseggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic rangesBig data and other challenges in the quest for orthologsToward community standards in the quest for orthologseggNOG v4.0: nested orthology inference across 3686 organismsStandardized benchmarking in the quest for orthologsComparative genomics reveals contraction in olfactory receptor genes in batsComputational biophysical, biochemical, and evolutionary signature of human R-spondin family proteins, the member of canonical Wnt/β-catenin signaling pathwayALF--a simulation framework for genome evolution.Evolution of the ferric reductase domain (FRD) superfamily: modularity, functional diversification, and signature motifsPhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.Inferring hierarchical orthologous groups from orthologous gene pairs.The impact of gene duplication, insertion, deletion, lateral gene transfer and sequencing error on orthology inference: a simulation studyThe OMA orthology database in 2015: function predictions, better plant support, synteny view and other improvements.A phylogeny-based benchmarking test for orthology inference reveals the limitations of function-based validationEfficient Gene Tree Correction Guided by Genome EvolutionAnnotated genes and nonannotated genomes: cross-species use of Gene Ontology in ecology and evolution research.The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces.Orthologous Matrix (OMA) algorithm 2.0: more robust to asymmetric evolutionary rates and more scalable hierarchical orthologous group inference.GATC: a genetic algorithm for gene tree construction under the Duplication-Transfer-Loss model of evolution.
P2860
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P2860
Conceptual framework and pilot study to benchmark phylogenomic databases based on reference gene trees
description
2011 nî lūn-bûn
@nan
2011 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի սեպտեմբերին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Conceptual framework and pilot ...... based on reference gene trees
@ast
Conceptual framework and pilot ...... based on reference gene trees
@en
Conceptual framework and pilot ...... based on reference gene trees
@nl
type
label
Conceptual framework and pilot ...... based on reference gene trees
@ast
Conceptual framework and pilot ...... based on reference gene trees
@en
Conceptual framework and pilot ...... based on reference gene trees
@nl
prefLabel
Conceptual framework and pilot ...... based on reference gene trees
@ast
Conceptual framework and pilot ...... based on reference gene trees
@en
Conceptual framework and pilot ...... based on reference gene trees
@nl
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Conceptual framework and pilot ...... based on reference gene trees
@en
P2860
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P3181
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10.1093/BIB/BBR034
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P577
2011-09-01T00:00:00Z