PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome. - Wikidata - awgldk - TriplyDB

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

http://www.wikidata.org/entity/Q34387795

about

Whole-genome analyses resolve early branches in the tree of life of modern birds The Solanum commersonii Genome Sequence Provides Insights into Adaptation to Stress Conditions and Genome Evolution of Wild Potato Relatives A Drosophila-centric view of protein tyrosine phosphatases The environment ontology in 2016: bridging domains with increased scope, semantic density, and interoperation.Horizontal acquisition of toxic alkaloid synthesis in a clade of plant associated fungi Origin and evolution of metabolic sub-cellular compartmentalization in eukaryotes Beyond the Whole-Genome Duplication: Phylogenetic Evidence for an Ancient Interspecies Hybridization in the Baker's Yeast Lineage Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs Big data and other challenges in the quest for orthologs HieranoiDB: a database of orthologs inferred by Hieranoid eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences Standardized benchmarking in the quest for orthologs Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes Mechanism of allosteric regulation of β2-adrenergic receptor by cholesterol.Protein Bioinformatics Databases and Resources.HIVed, a knowledgebase for differentially expressed human genes and proteins during HIV infection, replication and latency.Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx.ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.Transcription Factors in Fungi: TFome Dynamics, Three Major Families, and Dual-Specificity TFs Genome-wide annotation and functional identification of aphid GLUT-like sugar transporters.Computational biophysical, biochemical, and evolutionary signature of human R-spondin family proteins, the member of canonical Wnt/β-catenin signaling pathway Genenames.org: the HGNC resources in 2015 Origin, diversification and substrate specificity in the family of NCS1/FUR transporters.Highly expressed captured genes and cross-kingdom domains present in Helitrons create novel diversity in Pleurotus ostreatus and other fungi.The OMA orthology database in 2015: function predictions, better plant support, synteny view and other improvements.STBase: one million species trees for comparative biology.Enrichment of Triticum aestivum gene annotations using ortholog cliques and gene ontologies in other plants.Domain similarity based orthology detection Differential gene retention as an evolutionary mechanism to generate biodiversity and adaptation in yeasts PlantOrDB: a genome-wide ortholog database for land plants and green algae.OrthoVenn: a web server for genome wide comparison and annotation of orthologous clusters across multiple species.The Genomic Aftermath of Hybridization in the Opportunistic Pathogen Candida metapsilosis The Leishmania metaphylome: a comprehensive survey of Leishmania protein phylogenetic relationships Structural Motifs Critical for In Vivo Function and Stability of the RecQ-Mediated Genome Instability Protein Rmi1 Genome sequencing and secondary metabolism of the postharvest pathogen Penicillium griseofulvum Quest for Orthologs Entails Quest for Tree of Life: In Search of the Gene Stream.Partial Decay of Thiamine Signal Transduction Pathway Alters Growth Properties of Candida glabrata Holding it together: rapid evolution and positive selection in the synaptonemal complex of Drosophila Variability among Cucurbitaceae species (melon, cucumber and watermelon) in a genomic region containing a cluster of NBS-LRR genes OrthoReD: a rapid and accurate orthology prediction tool with low computational requirement.

P2860

Q21558572-9633DF23-894E-47AE-9461-63B69CF5B166 Q22065725-189DBE74-76DF-4D05-BFA7-62C85241C495 Q28082271-641ED11C-60BA-45D4-A84B-D52DDA3C4742 Q28598380-98B6615A-69B5-4168-8C7E-ABFFD4F3462F Q28602596-D824D546-86DA-44C9-B0A0-7DE95C821F3A Q28604238-D8D90A6D-A970-4879-882E-0206201949FC Q28633144-7BB0E4DE-EAB3-4711-AC04-1F53F946502B Q28650295-59CF3997-ADED-446B-A8D7-364F4CAAFCC0 Q28654614-17DBA72F-6BAB-4DA3-BF05-9167A96DFFA7 Q28818095-9458DDFE-F386-4F2B-8F9C-05F34751D8E8 Q30002335-397AB74A-4828-4190-9480-A70A13582038 Q30002371-D8936A88-BC74-4737-B6F2-C1AB62CE9DAF Q30360632-4C57F93D-C2CC-4919-8713-9D3422D20CDD Q30395783-4D5B198D-0288-4C3C-B84E-A7FDCD294B6F Q30398117-EB1D0150-3D4E-40A4-B73C-FC11FBAC38E5 Q30400491-388389F4-BB74-4E1C-941C-5ED2D11403CC Q30831935-20672B41-AA2B-456B-8B85-5C30405A756F Q31049606-7D3C8785-E61F-466B-ABFB-19609F1EB116 Q33634094-895B1DC4-40E2-4B5A-A0C1-06A1034E783C Q34045229-533EE787-6FB4-432D-AFCF-1EB2C2C9C6E6 Q34233989-7A99A61F-418D-4D75-A4F4-24AC71DF5F56 Q34445762-4EC18701-BEC8-43F6-AC5D-FB06C7994749 Q34464338-20217D27-EE55-47FA-A280-0FE38C5EC21A Q34896975-89E10D58-8352-4B6A-A03F-753DA2FB4060 Q35254048-50CD27B1-28C2-4469-A880-19C387D1D37D Q35560551-72150854-FDC5-43F3-8469-CFFF7027C109 Q35590938-FD0A503F-6FE0-451D-A0A3-64A291D87331 Q35629091-A61926FB-D6A3-47D4-973F-E92A7CA9F848 Q35673452-A3FD2695-694C-4487-809C-6AA3323FF124 Q35674932-20D2E310-0BCA-4DEF-9534-3A15EFDB4750 Q35810257-CE1E5CEB-D844-4BFF-92C9-A1249E944A86 Q35827279-FF7DC934-5E0B-4A60-940C-7FE80E75875D Q35827646-1D1A966C-BE49-4266-AA34-84EAEE881A51 Q35881852-179A62D8-DA6C-4411-9421-41C713033C21 Q35884691-203F4583-EB5D-4B8C-A963-1008952059C3 Q35915014-8890DB57-C162-49FF-A09C-36417489F969 Q35970611-B9A37D83-12BF-42E4-99CE-2CF83DE54058 Q36009961-59AE252E-3FF6-4933-8307-522517A34ADA Q36274518-652EA66C-B4EC-4488-B961-F2FE2CF1BD9D Q36410709-A083A271-64C0-4038-B67A-E745394630D7

P2860

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

http://www.wikidata.org/entity/Q34387795

description

2013 nî lūn-bûn

@nan

2013 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

@hyw

2013 թվականի նոյեմբերին հրատարակված գիտական հոդված

@hy

2013年の論文

@ja

2013年論文

@yue

2013年論文

@zh-hant

2013年論文

@zh-hk

2013年論文

@zh-mo

2013年論文

@zh-tw

2013年论文

@wuu

name

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

@ast

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

@en

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

@nl

type

label

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

@ast

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

@en

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

@nl

prefLabel

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

@ast

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

@en

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

@nl

P1433

Q34387795-E61C047E-DCAE-4548-B979-F0973F3AB176

P1476

Q34387795-A760B364-92F5-4854-8B8D-A912643D3590

P2093

Q34387795-210FB874-5781-4718-BD3A-A52AA2BBF6A5

P2860

Q34387795-019A3F3F-7DC2-4AA2-ACD0-1CFE4B468464

Q34387795-043F96CB-EAC4-4F7E-BAF4-A7AC333E7DA9

Q34387795-08BE9C9F-9F08-4C94-A5CF-F703FAF417BD

Q34387795-11061EFD-321A-4436-826F-C12A55C502EE

Q34387795-1AECE4A0-F91E-44E3-9C9E-64B013BE5BC4

Q34387795-21A2A33E-FFFD-4717-A38A-9007FA00A28D

Q34387795-230AFDB1-991A-43E4-87EE-DD1D015C97FC

Q34387795-2774CF44-57D0-4579-8407-31E6CEE89CA0

Q34387795-288AF0C4-9217-41B8-AE3F-036B2B2BA81D

Q34387795-28A4A09A-766F-4E39-9DB9-0B35F93A7668

P304

Q34387795-777BC1AE-44C9-4BCC-A787-7FC528952DE0

P31

Q34387795-1ECE11FF-B698-4F45-A0E2-1BD0C8452306

P356

Q34387795-B1768531-2B06-43E7-8B89-45FDFD8DDBE3

P407

Q34387795-A4E38108-2455-4D0E-8A62-5D1BF9574E98

P433

Q34387795-F49CAC25-A1E6-4829-89C9-51592485B582

P478

Q34387795-2F94B88F-BAE9-4252-9EBF-FCD7089B38AE

P50

Q34387795-3977197B-CB2F-4462-8EA2-00B2AAA64A19

Q34387795-8272B18A-D9BB-42F7-B695-9DA30DB1B7A9

Q34387795-8823D5C0-58AE-476A-ACD0-44F66FC5C085

Q34387795-C21425EE-8371-4BD9-B174-DE31BA064AB7

P577

Q34387795-3F5BA607-02E0-4AD6-8AB5-8749EC5067F8

P5875

Q34387795-A0B032A2-0402-4822-AE48-119806805CF3

P698

Q34387795-8FE8F78B-ACF8-4A07-A531-6FB6215D177E

P932

Q34387795-5039AA62-BCAE-4D44-AE3E-FB7A83AB7EB4

P356

P1433

Nucleic Acids Research

P1476

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

@en

P2093

Jaime Huerta-Cepas

http://www.w3.org/2001/XMLSchema#string

P2860

ETE: a python Environment for Tree Exploration

Databases of homologous gene families for comparative genomics

Comparative transcriptomics of early dipteran development

Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus

Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida

Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains

PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees

PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions

The Pfam protein families database

Conceptual framework and pilot study to benchmark phylogenomic databases based on reference gene trees

P304

D897-902

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1093/NAR/GKT1177

http://www.w3.org/2001/XMLSchema#string

P407

P433

Database issue

http://www.w3.org/2001/XMLSchema#string

P478

42

http://www.w3.org/2001/XMLSchema#string

P50

Salvador Capella-Gutierrez

Marina Marcet-Houben

Leszek P Pryszcz

P577

2013-11-25T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

258922032

http://www.w3.org/2001/XMLSchema#string

P698

24275491

http://www.w3.org/2001/XMLSchema#string

P932

3964985

http://www.w3.org/2001/XMLSchema#string