Site identification in high-throughput RNA-protein interaction data - Wikidata - awgldk - TriplyDB

Site identification in high-throughput RNA-protein interaction data

Site identification in high-throughput RNA-protein interaction data

http://www.wikidata.org/entity/Q30528777

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Global RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo Advances in the techniques for the prediction of microRNA targets High-throughput characterization of protein-RNA interactions Integrating Epigenomics into the Understanding of Biomedical Insight MOV10 and FMRP regulate AGO2 association with microRNA recognition elements POSTAR: a platform for exploring post-transcriptional regulation coordinated by RNA-binding proteins RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma.PIPE-CLIP: a comprehensive online tool for CLIP-seq data analysis.A model-based approach to identify binding sites in CLIP-Seq data.Computational Methods for CLIP-seq Data Processing.Assessing Computational Steps for CLIP-Seq Data Analysis.CLIP Tool Kit (CTK): a flexible and robust pipeline to analyze CLIP sequencing data.Bioinformatic tools for analysis of CLIP ribonucleoprotein data Argonaute proteins regulate HIV-1 multiply spliced RNA and viral production in a Dicer independent manner Advancing the functional utility of PAR-CLIP by quantifying background binding to mRNAs and lncRNAs GraphProt: modeling binding preferences of RNA-binding proteins.dCLIP: a computational approach for comparative CLIP-seq analyses.Transcriptome-wide discovery of microRNA binding sites in human brain.Computational Methods for MicroRNA Target Prediction.Leveraging cross-link modification events in CLIP-seq for motif discovery.Locus-specific targeting to the X chromosome revealed by the RNA interactome of CTCF.CLIPdb: a CLIP-seq database for protein-RNA interactions.Detecting riboSNitches with RNA folding algorithms: a genome-wide benchmark.Computational challenges, tools, and resources for analyzing co- and post-transcriptional events in high throughput.Design and bioinformatics analysis of genome-wide CLIP experiments.From benchmarking HITS-CLIP peak detection programs to a new method for identification of miRNA-binding sites from Ago2-CLIP data Transformation of the intestinal epithelium by the MSI2 RNA-binding protein.Recent computational developments on CLIP-seq data analysis and microRNA targeting implications.miRTarBase 2016: updates to the experimentally validated miRNA-target interactions database.αCP binding to a cytosine-rich subset of polypyrimidine tracts drives a novel pathway of cassette exon splicing in the mammalian transcriptome.RNA-binding protein IGF2BP3 targeting of oncogenic transcripts promotes hematopoietic progenitor proliferation.High-throughput analyses of hnRNP H1 dissects its multi-functional aspect.The Landscape of microRNA Targeting in Prostate Cancer Defined by AGO-PAR-CLIP.The PUF binding landscape in metazoan germ cells.rMAPS: RNA map analysis and plotting server for alternative exon regulation.TISdb: a database for alternative translation initiation in mammalian cells.Biological and bioinformatical approaches to study crosstalk of long-non-coding RNAs and chromatin-modifying proteins.CLIP: viewing the RNA world from an RNA-protein interactome perspective.Seten: a tool for systematic identification and comparison of processes, phenotypes, and diseases associated with RNA-binding proteins from condition-specific CLIP-seq profiles.Revealing protein-lncRNA interaction

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P2860

Site identification in high-throughput RNA-protein interaction data

http://www.wikidata.org/entity/Q30528777

description

2012 nî lūn-bûn

@nan

2012 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի սեպտեմբերին հրատարակված գիտական հոդված

@hy

2012年の論文

@ja

2012年論文

@yue

2012年論文

@zh-hant

2012年論文

@zh-hk

2012年論文

@zh-mo

2012年論文

@zh-tw

2012年论文

@wuu

name

Site identification in high-throughput RNA-protein interaction data

@ast

Site identification in high-throughput RNA-protein interaction data

@en

type

label

Site identification in high-throughput RNA-protein interaction data

@ast

Site identification in high-throughput RNA-protein interaction data

@en

prefLabel

Site identification in high-throughput RNA-protein interaction data

@ast

Site identification in high-throughput RNA-protein interaction data

@en

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P1476

Site identification in high-throughput RNA-protein interaction data

@en

P2093

Emad Bahrami-Samani

http://www.w3.org/2001/XMLSchema#string

Fedor V Karginov

http://www.w3.org/2001/XMLSchema#string

Jeremy R Sanford

http://www.w3.org/2001/XMLSchema#string

Mei Qiao

http://www.w3.org/2001/XMLSchema#string

Philip J Uren

http://www.w3.org/2001/XMLSchema#string

Suzanne C Burns

http://www.w3.org/2001/XMLSchema#string

P2860

A Pumilio-induced RNA structure switch in p27-3' UTR controls miR-221 and miR-222 accessibility

CLIPZ: a database and analysis environment for experimentally determined binding sites of RNA-binding proteins

starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data

doRiNA: a database of RNA interactions in post-transcriptional regulation

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution

Mapping in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data

Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP

An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells

Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps

HITS-CLIP yields genome-wide insights into brain alternative RNA processing

P304

3013-3020

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scholarly article

P356

10.1093/BIOINFORMATICS/BTS569

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P407

P433

23

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P478

28

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P50

Emily C. Hodges

P577

2012-09-28T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

231613661

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P698

23024010

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3509493

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