starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data - Wikidata - awgldk - TriplyDB

starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data

starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data

http://www.wikidata.org/entity/Q24615562

about

Circ2Traits: a comprehensive database for circular RNA potentially associated with disease and traits Specific impact of tobamovirus infection on the Arabidopsis small RNA profile Integrated analysis of dysregulated ncRNA and mRNA expression profiles in humans exposed to carbon nanotubes The 2011 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection doRiNA: a database of RNA interactions in post-transcriptional regulation Advances in the techniques for the prediction of microRNA targets Long non-coding RNA Databases in Cardiovascular Research Tiny giants of gene regulation: experimental strategies for microRNA functional studies Comparison of Prognostic MicroRNA Biomarkers in Blood and Tissues for Gastric Cancer RNA Binding Proteins in the miRNA Pathway Combinatorial Control of mRNA Fates by RNA-Binding Proteins and Non-Coding RNAs Tuning the engine: an introduction to resources on post-transcriptional regulation of gene expression Computational biology of RNA interactions Bioinformatic tools for microRNA dissection Identification of RNA-protein interaction networks using PAR-CLIP microRNAs and RNA-binding proteins: a complex network of interactions and reciprocal regulations in cancer Integrating Epigenomics into the Understanding of Biomedical Insight MBSTAR: multiple instance learning for predicting specific functional binding sites in microRNA targets RMBase: a resource for decoding the landscape of RNA modifications from high-throughput sequencing data The oncogenic MicroRNA Hsa-miR-155-5p targets the transcription factor ELK3 and links it to the hypoxia response Identification of miR-34 regulatory networks in settings of disease and antimiR-therapy: Implications for treating cardiac pathology and other diseases Finding microRNA targets in plants: current status and perspectives Improving miRNA-mRNA interaction predictions Integrating microRNA target predictions for the discovery of gene regulatory networks: a semi-supervised ensemble learning approach Nuclear outsourcing of RNA interference components to human mitochondria ChemiRs: a web application for microRNAs and chemicals A Bioinformatics Approach to the Identification of Variants Associated with Type 1 and Type 2 Diabetes Mellitus that Reside in Functionally Validated miRNAs Binding Sites.Meta-analysis of tRNA derived RNA fragments reveals that they are evolutionarily conserved and associate with AGO proteins to recognize specific RNA targets.Cis-acting polymorphisms affect complex traits through modifications of microRNA regulation pathways.MiR-21/Smad 7 signaling determines TGF-β1-induced CAF formation Site identification in high-throughput RNA-protein interaction data ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data.ProteoMirExpress: inferring microRNA and protein-centered regulatory networks from high-throughput proteomic and mRNA expression data starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data.CircNet: a database of circular RNAs derived from transcriptome sequencing data Identification of hub genes and regulatory factors of glioblastoma multiforme subgroups by RNA-seq data analysis miRTar2GO: a novel rule-based model learning method for cell line specific microRNA target prediction that integrates Ago2 CLIP-Seq and validated microRNA-target interaction data Identification of candidate miRNA biomarkers from miRNA regulatory network with application to prostate cancer.Downregulation of delta-aminolevulinate dehydratase is associated with poor prognosis in patients with breast cancer.Identification of circulating microRNAs for the differential diagnosis of Parkinson's disease and Multiple System Atrophy.

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starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data

http://www.wikidata.org/entity/Q24615562

description

2011 nî lūn-bûn

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2011 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի հունվարին հրատարակված գիտական հոդված

@hy

2011年の論文

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2011年論文

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2011年論文

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2011年論文

@zh-hk

2011年論文

@zh-mo

2011年論文

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2011年论文

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name

starBase: a database for explo ...... LIP-Seq and Degradome-Seq data

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starBase: a database for explo ...... LIP-Seq and Degradome-Seq data

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starBase: a database for explo ...... LIP-Seq and Degradome-Seq data

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type

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starBase: a database for explo ...... LIP-Seq and Degradome-Seq data

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starBase: a database for explo ...... LIP-Seq and Degradome-Seq data

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prefLabel

starBase: a database for explo ...... LIP-Seq and Degradome-Seq data

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starBase: a database for explo ...... LIP-Seq and Degradome-Seq data

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starBase: a database for explo ...... LIP-Seq and Degradome-Seq data

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Nucleic Acids Research

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starBase: a database for explo ...... LIP-Seq and Degradome-Seq data

@en

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Jian-Hua Yang

http://www.w3.org/2001/XMLSchema#string

Jun-Hao Li

http://www.w3.org/2001/XMLSchema#string

Yue-Qin Chen

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P2860

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Fast mapping of short sequences with mismatches, insertions and deletions using index structures

Human MicroRNA targets

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

Gene ontology: tool for the unification of biology

KEGG: kyoto encyclopedia of genes and genomes

MicroRNAs: target recognition and regulatory functions

Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP

Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans

deepBase: a database for deeply annotating and mining deep sequencing data

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943271

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10.1093/NAR/GKQ1056

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Database issue

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39

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21037263

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3013664

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