A novel normalization method for effective removal of systematic variation in microarray data. - Wikidata - awgldk - TriplyDB

A novel normalization method for effective removal of systematic variation in microarray data.

A novel normalization method for effective removal of systematic variation in microarray data.

http://www.wikidata.org/entity/Q31033962

about

miRNA studies in in vitro and in vivo activated hepatic stellate cells Activation of protein phosphatase 2A tumor suppressor as potential treatment of pancreatic cancer.Variation-preserving normalization unveils blind spots in gene expression profiling.DUSP10 regulates intestinal epithelial cell growth and colorectal tumorigenesis.Use of normalization methods for analysis of microarrays containing a high degree of gene effects Pathogen specific, IRF3-dependent signaling and innate resistance to human kidney infection.Inhibition of TIR domain signaling by TcpC: MyD88-dependent and independent effects on Escherichia coli virulence.Divergent LIN28-mRNA associations result in translational suppression upon the initiation of differentiation.Preprocessing differential methylation hybridization microarray data Graded Nodal/Activin signaling titrates conversion of quantitative phospho-Smad2 levels into qualitative embryonic stem cell fate decisions.Tbx3 improves the germ-line competency of induced pluripotent stem cells The hypoxia-inducible epigenetic regulators Jmjd1a and G9a provide a mechanistic link between angiogenesis and tumor growth.A unifying mechanism for cancer cell death through ion channel activation by HAMLET.STAT5 programs a distinct subset of GM-CSF-producing T helper cells that is essential for autoimmune neuroinflammation.Diagnostic prediction of complex diseases using phase-only correlation based on virtual sample template.Establishment and characterization of novel human primary and metastatic anaplastic thyroid cancer cell lines and their genomic evolution over a year as a primagraft.AMD1 is essential for ESC self-renewal and is translationally down-regulated on differentiation to neural precursor cells.CD166(pos) subpopulation from differentiated human ES and iPS cells support repair of acute lung injury.TIP60-miR-22 axis as a prognostic marker of breast cancer progression.Acetylation of C/EBPα inhibits its granulopoietic function.Synergistic effect of JQ1 and rapamycin for treatment of human osteosarcoma.Tumour-initiating cell-specific miR-1246 and miR-1290 expression converge to promote non-small cell lung cancer progression.C/EBPa controls acquisition and maintenance of adult haematopoietic stem cell quiescence.Gelsolin-mediated activation of PI3K/Akt pathway is crucial for hepatocyte growth factor-induced cell scattering in gastric carcinoma.BCOR regulates myeloid cell proliferation and differentiation.Targeted BMI1 inhibition impairs tumor growth in lung adenocarcinomas with low CEBPα expression.A Human Pluripotent Stem Cell Model of Facioscapulohumeral Muscular Dystrophy-Affected Skeletal Muscles.Non-canonical Notch signaling activates IL-6/JAK/STAT signaling in breast tumor cells and is controlled by p53 and IKKα/IKKβ.An orally available small imidazolium salt ameliorates inflammation and fibrosis in a murine model of cholestasis.MicroRNA-125b promotes neuronal differentiation in human cells by repressing multiple targets.A cohesin-OCT4 complex mediates Sox enhancers to prime an early embryonic lineage.Bacterial control of host gene expression through RNA polymerase II.Inhibition of the H3K9 methyltransferase G9A attenuates oncogenicity and activates the hypoxia signaling pathway.An RNA editing/dsRNA binding-independent gene regulatory mechanism of ADARs and its clinical implication in cancer.A FTH1 gene:pseudogene:microRNA network regulates tumorigenesis in prostate cancer.Stage-specific modulation of cortical neuronal development by Mmu-miR-134.The basic helix-loop-helix transcription factor SHARP1 is an oncogenic driver in MLL-AF6 acute myelogenous leukemia.

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P2860

A novel normalization method for effective removal of systematic variation in microarray data.

http://www.wikidata.org/entity/Q31033962

description

2006 nî lūn-bûn

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2006 թուականի Մարտին հրատարակուած գիտական յօդուած

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2006 թվականի մարտին հրատարակված գիտական հոդված

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2006年の論文

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2006年論文

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2006年論文

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2006年論文

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A novel normalization method f ...... variation in microarray data.

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Chew-Yeam Yam

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He Yang

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Praveen Vijayakumar

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Su-Wen Chua

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Victor V T Wong

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P2860

Evaluation of normalization methods for microarray data

Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation.

Microarray data normalization and transformation

Analysis of variance for gene expression microarray data

Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray

Control genes and variability: absence of ubiquitous reference transcripts in diverse mammalian expression studies.

Monitoring global messenger RNA changes in externally controlled microarray experiments.

A segmental nearest neighbor normalization and gene identification method gives superior results for DNA-array analysis.

Manufacturing DNA microarrays of high spot homogeneity and reduced background signal.

Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects.

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